RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 STX2P32856 288 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 GP5P40197 560 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 GRIA3P42263 894 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 ITGA1P56199 1179 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 KBTBD12Q3ZCT8 623 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 FIGLAQ6QHK4 219 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 ZNF517Q6ZMY9 492 aaPredicted RBP21.25■□□□□ 0.99
SNX3-202ENST00000349379 TMEM126BQ8IUX1 230 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 SLC38A9Q8NBW4 561 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 ZUFSPQ96AP4 578 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 GPR22Q99680 433 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 PARVBQ9HBI1 364 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 POPDC3Q9HBV1 291 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 LHX9Q9NQ69 397 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 ENAMQ9NRM1 1142 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.25■□□□□ 0.99
SNX3-202ENST00000349379 CCDC88CQ9P219 2028 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 MTRF1LQ9UGC7 380 aaKnown RBP21.25■□□□□ 0.99
SNX3-202ENST00000349379 SERTAD3Q9UJW9 196 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 ZFYVE26Q68DK2 2539 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 CHD6Q8TD26 2715 aa21.25■□□□□ 0.99
SNX3-202ENST00000349379 MGAQ8IWI9 3026 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 RORAP35398 523 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 GPS2Q13227 327 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 NAB1Q13506 487 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 PHKG1Q16816 387 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 DEFB110Q30KQ9 67 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 PRAMEF17Q5VTA0 474 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 SUSD1Q6UWL2 747 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 CEP128Q6ZU80 1094 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 CEP97Q8IW35 865 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 MCOLN3Q8TDD5 553 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 FBF1Q8TES7 1133 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 ANKRD7Q92527 254 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 SLC45A3Q96JT2 553 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 MIPEPQ99797 713 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 WDR70Q9NW82 654 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 PLCL2Q9UPR0 1127 aa21.24■□□□□ 0.99
SNX3-202ENST00000349379 E7EQ34 232 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 SYF2O95926 243 aaKnown RBP21.23■□□□□ 0.99
SNX3-202ENST00000349379 YBX1P67809 324 aaKnown RBP21.23■□□□□ 0.99
SNX3-202ENST00000349379 POU4F1Q01851 419 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 ZNF460Q14592 562 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 PPFIBP2Q8ND30 876 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 CCDC138Q96M89 665 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 FMO2Q99518 471 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 EFHD1Q9BUP0 239 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 FUT8Q9BYC5 575 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 TSPYL1Q9H0U9 437 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 AKIRIN1Q9H9L7 192 aaPredicted RBP21.23■□□□□ 0.99
SNX3-202ENST00000349379 L2HGDHQ9H9P8 463 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 GPN2Q9H9Y4 310 aaPredicted RBP21.23■□□□□ 0.99
SNX3-202ENST00000349379 EURLQ9NYK6 297 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 NINJ2Q9NZG7 142 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 STOX2Q9P2F5 926 aaPredicted RBP21.23■□□□□ 0.99
SNX3-202ENST00000349379 TXNDC16Q9P2K2 825 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 IKZF3Q9UKT9 509 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 PADI1Q9ULC6 663 aa21.23■□□□□ 0.99
SNX3-202ENST00000349379 MTO1Q9Y2Z2 717 aaKnown RBP21.23■□□□□ 0.99
SNX3-202ENST00000349379 OR2A25A4D2G3 310 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 CTSBP07858 339 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 F8A1P23610 371 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 CMPK1P30085 196 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 GCGRP47871 477 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 PRDX1Q06830 199 aaKnown RBP21.22■□□□□ 0.99
SNX3-202ENST00000349379 NAA25Q14CX7 972 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 ZNF385CQ66K41 422 aaPredicted RBP21.22■□□□□ 0.99
SNX3-202ENST00000349379 SBSNQ6UWP8 590 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 CTAGE3PQ8IX95 158 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 SYTL1Q8IYJ3 562 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 NKAPQ8N5F7 415 aaKnown RBP21.22■□□□□ 0.99
SNX3-202ENST00000349379 PPM1NQ8N819 430 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 KIAA1143Q96AT1 154 aaPredicted RBP21.22■□□□□ 0.99
SNX3-202ENST00000349379 ZNF285Q96NJ3 590 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 ACTR5Q9H9F9 607 aaPredicted RBP21.22■□□□□ 0.99
SNX3-202ENST00000349379 SLC6A20Q9NP91 592 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 PCMTD2Q9NV79 361 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 ANKMY1Q9P2S6 941 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 TAC3Q9UHF0 121 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 IL17BQ9UHF5 180 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 CROTQ9UKG9 612 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 NBEAQ8NFP9 2946 aa21.22■□□□□ 0.99
SNX3-202ENST00000349379 IGKV1-8A0A0C4DH67 115 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 ZNF749O43361 778 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 CTSVO60911 334 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 OR2B3O76000 313 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 ENO2P09104 434 aaPredicted RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 CCNYL3P0C7X3 344 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 SAT1P21673 171 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 RPA3P35244 121 aaPredicted RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 AP1S2P56377 157 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 EFTUD2Q15029 972 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNX3-202ENST00000349379 ZKSCAN8Q15776 578 aaPredicted RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 PPP1R3AQ16821 1122 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 ZC3H12BQ5HYM0 836 aaKnown RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 UBAP2Q5T6F2 1119 aaKnown RBP21.21■□□□□ 0.99
SNX3-202ENST00000349379 GRTP1Q5TC63 336 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 ICE2Q659A1 982 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 ZNF425Q6IV72 752 aa21.21■□□□□ 0.99
SNX3-202ENST00000349379 MBOAT1Q6ZNC8 495 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms