RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 SLCO6A1Q86UG4 719 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 PIK3C3Q8NEB9 887 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 CDC26Q8NHZ8 85 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 C2orf15Q8WU43 125 aaKnown RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 SLC32A1Q9H598 525 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 RETREG1Q9H6L5 497 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 PCDHGA10Q9Y5H3 936 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 GREM1O60565 184 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 WDR47O94967 919 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 HOXB9P17482 250 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 ITIH1P19827 911 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 TPP2P29144 1249 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 RXRGP48443 463 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 MASP1P48740 699 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 CRTC1Q6UUV9 634 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 UBE2R2Q712K3 238 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 RBM12BQ8IXT5 1001 aaKnown RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 TMEM132CQ8N3T6 1108 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 BEND7Q8N7W2 519 aaPredicted RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 BBS2Q9BXC9 721 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 STARD7Q9NQZ5 370 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 THG1LQ9NWX6 298 aaKnown RBP17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 MTRRQ9UBK8 725 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 CD84Q9UIB8 345 aa17.6■□□□□ 0.41
PTP4A3-202ENST00000349124 A0A1W2PQ45 241 aaPredicted RBP17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 A0A1W2PQY0 241 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 ADAM23O75077 832 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 GSSP48637 474 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 GABARAPL2P60520 117 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 EPS8Q12929 822 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 SERPINA13PQ6UXR4 307 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 ANKRD13BQ86YJ7 626 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 KLHL23Q8NBE8 558 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 AUTS2Q8WXX7 1259 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 RPL3LQ92901 407 aaKnown RBP17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 SCLYQ96I15 445 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 TRIT1Q9H3H1 467 aaKnown RBP17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 INTS6Q9UL03 887 aaKnown RBP17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 PMF1-BGLAPU3KQ54 211 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 RECQL5O94762 991 aaPredicted RBP17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 RYKP34925 604 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 AP1S1P61966 158 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 NCS1P62166 190 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 ZNF621Q6ZSS3 439 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 DNAJB7Q7Z6W7 309 aaPredicted RBP17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 HIPK1Q86Z02 1210 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 CLECL1Q8IZS7 167 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 OR52E4Q8NGH9 312 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 VOPP1Q96AW1 172 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 HTATIP2Q9BUP3 242 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 SIRT5Q9NXA8 310 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 NAALAD2Q9Y3Q0 740 aa17.59■□□□□ 0.41
PTP4A3-202ENST00000349124 TMEM247A6NEH6 219 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 FADS2O95864 444 aaKnown RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 SELPP16109 830 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 PORP16435 677 aaPredicted RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 ENGP17813 658 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 SPAM1P38567 509 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 GSTM4Q03013 218 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 PAGE2BQ5JRK9 111 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 LRRC66Q68CR7 880 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 SHQ1Q6PI26 577 aaKnown RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 Q6ZPB1 254 aaPredicted RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 CCDC71Q8IV32 467 aaPredicted RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 UBTD2Q8WUN7 234 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 FOXJ1Q92949 421 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 GLMNQ92990 594 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 REXO5Q96IC2 774 aaKnown RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 FAM210AQ96ND0 272 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 ZNF347Q96SE7 839 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 P2RY13Q9BPV8 354 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 REXO4Q9GZR2 422 aaKnown RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 ZNF334Q9HCZ1 680 aaPredicted RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 INIPQ9NRY2 104 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 PDP1Q9P0J1 537 aaPredicted RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 PNMA8BQ9ULN7 279 aaPredicted RBP17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 BTBD3Q9Y2F9 522 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 YIPF1Q9Y548 306 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 ORC6Q9Y5N6 252 aa17.58■□□□□ 0.41
PTP4A3-202ENST00000349124 KCNE1BA0A087WTH5 132 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 SERPINB7O75635 380 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 CPSF4O95639 269 aaKnown RBP17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 MT-ND2P03891 347 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 NUDT7P0C024 238 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 PSMB9P28065 219 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 CD70P32970 193 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 ALDH7A1P49419 539 aaKnown RBP17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 CASP9P55211 416 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 OR2T5Q6IEZ7 315 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 NPAS4Q8IUM7 802 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 OR2T29Q8NH02 315 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 MYLIPQ8WY64 445 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 MAGIXQ9H6Y5 334 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 ASIC5Q9NY37 505 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 PCDH10Q9P2E7 1040 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 MAN2B2Q9Y2E5 1009 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 CPQQ9Y646 472 aa17.58■□□□□ 0.4
PTP4A3-202ENST00000349124 ZBBXA8MT70 800 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms