RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 APOL3O95236 402 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 GLP2RO95838 553 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 HMBSP08397 361 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 MTHFD2P13995 350 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 HOXA11P31270 313 aaPredicted RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 CDKN1CP49918 316 aaPredicted RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 CLCN7P51798 805 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 GNASQ5JWF2 1037 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 GPRIN3Q6ZVF9 776 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 SPPL2AQ8TCT8 520 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 SLC13A3Q8WWT9 602 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 EGFL8Q99944 293 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 ELOVL6Q9H5J4 265 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 NLKQ9UBE8 527 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 UXTQ9UBK9 157 aaPredicted RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 ZNF639Q9UID6 485 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 OR2A25A4D2G3 310 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 PLK4O00444 970 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 PLD2O14939 933 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 POLR1CO15160 346 aaPredicted RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 KRT6AP02538 564 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 KRT6BP04259 564 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 PPP3CCP48454 512 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 ST3GAL4Q11206 333 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 MRPL28Q13084 256 aaKnown RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 MAD2L1BPQ15013 274 aaPredicted RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 PTPRRQ15256 657 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 WSCD1Q658N2 575 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 PLET1Q6UQ28 207 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 WDR36Q8NI36 951 aaKnown RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 SLC7A6Q92536 515 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 MRGPRX2Q96LB1 330 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 TSGA13Q96PP4 275 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 IL4I1Q96RQ9 567 aa14.78□□□□□ -0.04
PTBP1-201ENST00000349038 PPIL3Q9H2H8 161 aaKnown RBP14.78□□□□□ -0.04
PTBP1-201ENST00000349038 DNAJC25-GNG10A0A024R161 153 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 FAM234BA2RU67 622 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 AP2A2O94973 939 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 NPR3P17342 541 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 GEMP55040 296 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 ERVK-8P63133 956 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 ARHGAP1Q07960 439 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 UGT8Q16880 541 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 ZNF284Q2VY69 593 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 RNASE12Q5GAN4 147 aaKnown RBP14.77□□□□□ -0.04
PTBP1-201ENST00000349038 PAQR9Q6ZVX9 377 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 DPP9Q86TI2 863 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 RASAL3Q86YV0 1011 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 EFHBQ8N7U6 833 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 B3GALNT2Q8NCR0 500 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 UBXN10Q96LJ8 280 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 OR2A14Q96R47 310 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 TRIM45Q9H8W5 580 aaPredicted RBP14.77□□□□□ -0.04
PTBP1-201ENST00000349038 SLC23A1Q9UHI7 598 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 SLC6A14Q9UN76 642 aa14.77□□□□□ -0.04
PTBP1-201ENST00000349038 ZNF780AO75290 641 aaPredicted RBP14.77□□□□□ -0.05
PTBP1-201ENST00000349038 SSTR2P30874 369 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 HUNKP57058 714 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 EFR3AQ14156 821 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 KANK2Q63ZY3 851 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 TLK2Q86UE8 772 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 SIDT2Q8NBJ9 832 aaKnown RBP14.77□□□□□ -0.05
PTBP1-201ENST00000349038 GTPBP3Q969Y2 492 aaKnown RBP14.77□□□□□ -0.05
PTBP1-201ENST00000349038 BCL7BQ9BQE9 202 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 ATP13A2Q9NQ11 1180 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 FAM8A1Q9UBU6 413 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 ZNF225Q9UK10 706 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 COL1A2P08123 1366 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 J3KR12 359 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 LRRTM2O43300 516 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 NIPSNAP2O75323 286 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 NRIP1P48552 1158 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 QPRTQ15274 297 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 FXNQ16595 210 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 ZNF549Q6P9A3 640 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 Q6ZSR9 355 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 CCDC117Q8IWD4 279 aaPredicted RBP14.77□□□□□ -0.05
PTBP1-201ENST00000349038 SIMC1Q8NDZ2 872 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 TNIP3Q96KP6 325 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 DUSP21Q9H596 190 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 TREX1Q9NSU2 369 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 UBQLN1Q9UMX0 589 aaKnown RBP14.77□□□□□ -0.05
PTBP1-201ENST00000349038 DUSP12Q9UNI6 340 aa14.77□□□□□ -0.05
PTBP1-201ENST00000349038 TTC3P53804 2025 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 E9PAM4 449 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 TOXO94900 526 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 SLITRK5O94991 958 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 MATN4O95460 622 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 S1PR4O95977 384 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 OR1E2P47887 323 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 RFX2P48378 723 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 TTLL4Q14679 1199 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 ARHGEF6Q15052 776 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 PTPRNQ16849 979 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 LETMD1Q6P1Q0 360 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 DOK6Q6PKX4 331 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 DLK2Q6UY11 383 aa14.76□□□□□ -0.05
PTBP1-201ENST00000349038 APOBEC3FQ8IUX4 373 aaKnown RBP14.76□□□□□ -0.05
PTBP1-201ENST00000349038 CCDC71Q8IV32 467 aaPredicted RBP14.76□□□□□ -0.05
PTBP1-201ENST00000349038 DENND1CQ8IV53 801 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms