RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 PRAMEF13Q5VWM6 474 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 FRG2Q64ET8 278 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 DUS1LQ6P1R4 473 aaKnown RBP18.08■□□□□ 0.48
PTN-201ENST00000348225 LCTLQ6UWM7 567 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 IL17FQ96PD4 163 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 FRG2BQ96QU4 278 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 SLC25A23Q9BV35 468 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 CADM1Q9BY67 442 aaKnown RBP18.08■□□□□ 0.48
PTN-201ENST00000348225 PCBD2Q9H0N5 130 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 MMADHCQ9H3L0 296 aaPredicted RBP18.08■□□□□ 0.48
PTN-201ENST00000348225 SLC40A1Q9NP59 571 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 FARSBQ9NSD9 589 aaKnown RBP18.08■□□□□ 0.48
PTN-201ENST00000348225 TRNAU1APQ9NX07 287 aaKnown RBP18.08■□□□□ 0.48
PTN-201ENST00000348225 CCDC167Q9P0B6 97 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 PLAGL1Q9UM63 463 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 SIT1Q9Y3P8 196 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 CCL27Q9Y4X3 112 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 TNFP01375 233 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 SNRPB2P08579 225 aaKnown RBP18.07■□□□□ 0.48
PTN-201ENST00000348225 NPPBP16860 134 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 MTAPQ13126 283 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 E2F2Q14209 437 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 CLCA4Q14CN2 919 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 ALG11Q2TAA5 492 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 PDCD4Q53EL6 469 aaKnown RBP18.07■□□□□ 0.48
PTN-201ENST00000348225 PAGE2BQ5JRK9 111 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 WASH2PQ6VEQ5 465 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 GK5Q6ZS86 529 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 TMPRSS11BQ86T26 416 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 FAM160A2Q8N612 972 aaPredicted RBP18.07■□□□□ 0.48
PTN-201ENST00000348225 SLC5A11Q8WWX8 675 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 NEIL2Q969S2 332 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 REPS1Q96D71 796 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 WDR34Q96EX3 536 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 SPACA7Q96KW9 195 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 EFCAB11Q9BUY7 163 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 BRINP2Q9C0B6 783 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 EHD1Q9H4M9 534 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 WASH6PQ9NQA3 447 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 PRDM8Q9NQV8 689 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 TMEM45AQ9NWC5 275 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 NDE1Q9NXR1 346 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 NOP53Q9NZM5 478 aaKnown RBP18.07■□□□□ 0.48
PTN-201ENST00000348225 PCDHGA11Q9Y5H2 935 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 GPR45Q9Y5Y3 372 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 DGKBQ9Y6T7 804 aa18.07■□□□□ 0.48
PTN-201ENST00000348225 LRP4O75096 1905 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 H0YIV9 168 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 SCAMP1O15126 338 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 RSL1D1O76021 490 aaKnown RBP18.06■□□□□ 0.48
PTN-201ENST00000348225 THEGLP0DJG4 465 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 MTHFD1P11586 935 aaKnown RBP18.06■□□□□ 0.48
PTN-201ENST00000348225 CPOXP36551 454 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 PGM1P36871 562 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 DIO3P55073 304 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 CSTF3Q12996 717 aaKnown RBP18.06■□□□□ 0.48
PTN-201ENST00000348225 RPE65Q16518 533 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 ATG9BQ674R7 924 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 PAOXQ6QHF9 649 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 SUSD1Q6UWL2 747 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 ABRAXAS1Q6UWZ7 409 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 SLCO4C1Q6ZQN7 724 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 HID1Q8IV36 788 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 PARP9Q8IXQ6 854 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 FRMD1Q8N878 549 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 CADM4Q8NFZ8 388 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 FBXO27Q8NI29 283 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 HMGCLL1Q8TB92 370 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 SMPDL3AQ92484 453 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 UTP4Q969X6 686 aaKnown RBP18.06■□□□□ 0.48
PTN-201ENST00000348225 MTFMTQ96DP5 389 aaKnown RBP18.06■□□□□ 0.48
PTN-201ENST00000348225 CAMK1GQ96NX5 476 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 C1orf50Q9BV19 199 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 EFCAB1Q9HAE3 211 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 LRTM1Q9HBL6 345 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 MUTYHQ9UIF7 546 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 EIF3LQ9Y262 564 aaKnown RBP18.06■□□□□ 0.48
PTN-201ENST00000348225 COLEC10Q9Y6Z7 277 aa18.06■□□□□ 0.48
PTN-201ENST00000348225 AIM2O14862 343 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 SLC2A4P14672 509 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 CD22P20273 847 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 PRPH2P23942 346 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 NDUFS1P28331 727 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ACTR1BP42025 376 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 CXCL12P48061 93 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 PXNP49023 591 aaPredicted RBP18.05■□□□□ 0.48
PTN-201ENST00000348225 NUDT2P50583 147 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 RAB28P51157 221 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ACTR1AP61163 376 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 RPL38P63173 70 aaKnown RBP18.05■□□□□ 0.48
PTN-201ENST00000348225 HMGCS1Q01581 520 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ILF3Q12906 894 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTN-201ENST00000348225 LAPTM5Q13571 262 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 HIST2H2ACQ16777 129 aaPredicted RBP18.05■□□□□ 0.48
PTN-201ENST00000348225 C10orf62Q5T681 223 aaPredicted RBP18.05■□□□□ 0.48
PTN-201ENST00000348225 HIST2H2AA3Q6FI13 130 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 C16orf89Q6UX73 402 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 ZFAND4Q86XD8 727 aa18.05■□□□□ 0.48
PTN-201ENST00000348225 DCP2Q8IU60 420 aaKnown RBP18.05■□□□□ 0.48
PTN-201ENST00000348225 SLC22A18ASQ8N1D0 253 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms