RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 CXXC1Q9P0U4 656 aaPredicted RBP19.55■□□□□ 0.72
SPG7-202ENST00000341316 IFT80Q9P2H3 777 aaPredicted RBP19.55■□□□□ 0.72
SPG7-202ENST00000341316 ADGRE2Q9UHX3 823 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 SNX6Q9UNH7 406 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 IRAK3Q9Y616 596 aa19.55■□□□□ 0.72
SPG7-202ENST00000341316 A0A1W2PQ67 120 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 ARHGEF15O94989 841 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 PRSS23O95084 383 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 GSNP06396 782 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 HLCSP50747 726 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 ZIK1Q3SY52 487 aaPredicted RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 FAM98BQ52LJ0 330 aaKnown RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 CCNYL2Q5T2Q4 361 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 GCNT7Q6ZNI0 430 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 RASGRP3Q8IV61 690 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 TBC1D15Q8TC07 691 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 TMBIM1Q969X1 311 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 PPP1R14BQ96C90 147 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 KAT8Q9H7Z6 458 aaKnown RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 DNAJC11Q9NVH1 559 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 PCDHGA11Q9Y5H2 935 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 GSTA4O15217 222 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 LRATO95237 230 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 TFPTP0C1Z6 253 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 POLR2EP19388 210 aaKnown RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 CD22P20273 847 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 ELK4P28324 431 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 POLR2IP36954 125 aaKnown RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 CDKN2CP42773 168 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 CBX2Q14781 532 aaPredicted RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 HENMT1Q5T8I9 393 aaKnown RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 SPRED2Q7Z698 418 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 PLPP6Q8IY26 295 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 LILRA3Q8N6C8 439 aaPredicted RBP19.54■□□□□ 0.72
SPG7-202ENST00000341316 LIMD1Q9UGP4 676 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 INVSQ9Y283 1065 aa19.54■□□□□ 0.72
SPG7-202ENST00000341316 ELOVL7A1L3X0 281 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 UPK3BL1B0FP48 263 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 UPK3BL2E5RIL1 263 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 SLC16A5O15375 505 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 B4GAT1O43505 415 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 C1QCP02747 245 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 ALBP02768 609 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 CYP2A6P11509 494 aaPredicted RBP19.53■□□□□ 0.72
SPG7-202ENST00000341316 HOXB9P17482 250 aaPredicted RBP19.53■□□□□ 0.72
SPG7-202ENST00000341316 CYP2A7P20853 494 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 DDX6P26196 483 aaKnown RBP eCLIP19.53■□□□□ 0.72
SPG7-202ENST00000341316 PTPN6P29350 595 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 GZMMP51124 257 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 MAPK10P53779 464 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 IST1P53990 364 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 SP140Q13342 867 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 DMC1Q14565 340 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.53■□□□□ 0.72
SPG7-202ENST00000341316 XKR5Q6UX68 686 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 TERB1Q8NA31 727 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 MCOLN3Q8TDD5 553 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 APOLD1Q96LR9 279 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 YTHDF1Q9BYJ9 559 aaKnown RBP19.53■□□□□ 0.72
SPG7-202ENST00000341316 CHD9Q3L8U1 2897 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 NOTCH4Q99466 2003 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 RANBP2P49792 3224 aaKnown RBP19.53■□□□□ 0.72
SPG7-202ENST00000341316 CXCR6O00574 342 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 SYN1P17600 705 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 MTHFRP42898 656 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 CTSCP53634 463 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 DCDC1P59894 354 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 CHRNB3Q05901 458 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 ABRQ12979 859 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 CHIT1Q13231 466 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 CCSMST1Q4G0I0 132 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 AADATQ8N5Z0 425 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 DDHD1Q8NEL9 900 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 GIPC3Q8TF64 312 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 ING5Q8WYH8 240 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 MUS81Q96NY9 551 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 LRRC3BQ96PB8 259 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 CPPED1Q9BRF8 314 aaPredicted RBP19.53■□□□□ 0.72
SPG7-202ENST00000341316 TBCCD1Q9NVR7 557 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 GPRC5BQ9NZH0 403 aa19.53■□□□□ 0.72
SPG7-202ENST00000341316 ARHGEF33A8MVX0 844 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 GMNNO75496 209 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 SLCO2B1O94956 709 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 EPCAMP16422 314 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 PRPH2P23942 346 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 S100A3P33764 101 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 HALP42357 657 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 BNIP3Q12983 259 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 PGS1Q32NB8 556 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 ARHGAP15Q53QZ3 475 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 LRIF1Q5T3J3 769 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 ZNF697Q5TEC3 545 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 FRG2Q64ET8 278 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 CYP2U1Q7Z449 544 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 NECAB2Q7Z6G3 386 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 CALHM3Q86XJ0 350 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 RASGEF1AQ8N9B8 481 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 CMTM7Q96FZ5 175 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 FRG2BQ96QU4 278 aa19.52■□□□□ 0.72
SPG7-202ENST00000341316 KCNH6Q9H252 994 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms