RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 CNOT11Q9UKZ1 510 aaKnown RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 DUSP12Q9UNI6 340 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 WDR90Q96KV7 1748 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 TTC24A2A3L6 582 aaPredicted RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 MCIDASD6RGH6 385 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 AP3D1O14617 1153 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 CST1P01037 141 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 GRSF1Q12849 480 aaKnown RBP eCLIP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 FAM174BQ3ZCQ3 159 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 DCUN1D3Q8IWE4 304 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 EFCAB3Q8N7B9 438 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 FUBP1Q96AE4 644 aaKnown RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 SLC22A18Q96BI1 424 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 RDH12Q96NR8 316 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 SLC9A8Q9Y2E8 581 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 AP1M2Q9Y6Q5 423 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 WASF2Q9Y6W5 498 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 ISM1B1AKI9 464 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 TMEM233B4DJY2 109 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 T-ENOLP0DO92 83 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 XRCC1P18887 633 aaPredicted RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 SPINT3P49223 89 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 BTN2A1Q7KYR7 527 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 GRASPQ7Z6J2 395 aaPredicted RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 GSTO2Q9H4Y5 243 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 WDR26Q9H7D7 661 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 GPRC5BQ9NZH0 403 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 DKK3Q9UBP4 350 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 LHX3Q9UBR4 397 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 DNAJB9Q9UBS3 223 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 FAM25AB3EWG3 89 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 FAM25CB3EWG5 89 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 FAM25GB3EWG6 89 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 TAF4O00268 1085 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 NUAK1O60285 661 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 HMGA1P17096 107 aaKnown RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 SOX11P35716 441 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 GJA8P48165 433 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 AGTRAPQ6RW13 159 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 ZFAND4Q86XD8 727 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 MRPL43Q8N983 215 aaKnown RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 NEK7Q8TDX7 302 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 SLC47A1Q96FL8 570 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 SEMA6AQ9H2E6 1030 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 SDR39U1Q9NRG7 319 aaPredicted RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 TMEM30AQ9NV96 361 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 MAGEB17A8MXT2 336 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 GRID2O43424 1007 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 HRH2P25021 359 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 ATP13A5Q4VNC0 1218 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 MBOAT1Q6ZNC8 495 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 KBTBD6Q86V97 674 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 CFAP206Q8IYR0 622 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 TRPV3Q8NET8 790 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 OR10H5Q8NGA6 315 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 CD200R1Q8TD46 325 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 MAGEE2Q8TD90 523 aaPredicted RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 TEFMQ96QE5 360 aaKnown RBP7.42□□□□□ -1.22
HIPK1-201ENST00000340480 PCDH12Q9NPG4 1184 aa7.42□□□□□ -1.22
HIPK1-201ENST00000340480 ADAMDEC1O15204 470 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 EEDO75530 441 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 HSD17B1P14061 328 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 GJA1P17302 382 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 SLC6A2P23975 617 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 PEX2P28328 305 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 CRATP43155 626 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 RPS9P46781 194 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ARHGDIBP52566 201 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 IL5RAQ01344 420 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 COX10Q12887 443 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 DHCR24Q15392 516 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 PTCHD3Q3KNS1 767 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ITPRIPL2Q3MIP1 535 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 TYW3Q6IPR3 259 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 SPESP1Q6UW49 350 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ERN2Q76MJ5 926 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ERMP1Q7Z2K6 904 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 CLDN19Q8N6F1 224 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ZNF483Q8TF39 744 aaPredicted RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 NACC2Q96BF6 587 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 CLIP3Q96DZ5 547 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 FERD3LQ96RJ6 166 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ATOH8Q96SQ7 321 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 NOL6Q9H6R4 1146 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 PACSIN3Q9UKS6 424 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ACSL5Q9ULC5 683 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 FADS3Q9Y5Q0 445 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 DNAJC15Q9Y5T4 150 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 E7ENX8 843 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 AHCYL1O43865 530 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 UGT2B11O75310 529 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 RNASEH2AO75792 299 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 CMPK1P30085 196 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 PSMD4P55036 377 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 TIMM50Q3ZCQ8 353 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 ARMCX4Q5H9R4 360 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 TMC5Q6UXY8 1006 aa7.41□□□□□ -1.22
HIPK1-201ENST00000340480 MTFMTQ96DP5 389 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 TRMT61BQ9BVS5 477 aaKnown RBP7.41□□□□□ -1.22
HIPK1-201ENST00000340480 SLC12A9Q9BXP2 914 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms