RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 CCNFP41002 786 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 AIMP2Q13155 320 aaKnown RBP18.62■□□□□ 0.57
ITGA4-202ENST00000339307 NR6A1Q15406 480 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 FAM214AQ32MH5 1076 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 CTSL3PQ5NE16 218 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 CASC4Q6P4E1 433 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 DRICH1Q6PGQ1 229 aaPredicted RBP18.62■□□□□ 0.57
ITGA4-202ENST00000339307 FKBP10Q96AY3 582 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 PDLIM2Q96JY6 352 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 ACAT2Q9BWD1 397 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 ASF1BQ9NVP2 202 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 PLEKHB1Q9UF11 243 aaPredicted RBP18.62■□□□□ 0.57
ITGA4-202ENST00000339307 ZC3H7BQ9UGR2 993 aaKnown RBP18.62■□□□□ 0.57
ITGA4-202ENST00000339307 MAST4O15021 2626 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 NAV2Q8IVL1 2488 aa18.62■□□□□ 0.57
ITGA4-202ENST00000339307 TARM1B6A8C7 271 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 E5RI56 91 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 NIPSNAP2O75323 286 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 CCDC175P0C221 793 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 ERVK-10P10266 1014 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 ITGAXP20702 1163 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 MMP11P24347 488 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 RBBP7Q16576 425 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 NKG7Q16617 165 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 YOD1Q5VVQ6 348 aaPredicted RBP18.61■□□□□ 0.57
ITGA4-202ENST00000339307 LRRC8BQ6P9F7 803 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 PARP9Q8IXQ6 854 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 PRSS58Q8IYP2 241 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 KIFC1Q9BW19 673 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 ZBTB20Q9HC78 741 aaPredicted RBP18.61■□□□□ 0.57
ITGA4-202ENST00000339307 SLC6A20Q9NP91 592 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 CTSFQ9UBX1 484 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 ZKSCAN5Q9Y2L8 839 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 LRRK2Q5S007 2527 aa18.61■□□□□ 0.57
ITGA4-202ENST00000339307 TCRBV7S3A2A0A539 114 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 A1L4Q6 167 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 HYKKA2RU49 373 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 CTSVO60911 334 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 ALBP02768 609 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 SARNPP82979 210 aaKnown RBP18.6■□□□□ 0.57
ITGA4-202ENST00000339307 ELOAQ14241 798 aaKnown RBP18.6■□□□□ 0.57
ITGA4-202ENST00000339307 FASTKQ14296 549 aaKnown RBP18.6■□□□□ 0.57
ITGA4-202ENST00000339307 RNF187Q5TA31 235 aaPredicted RBP18.6■□□□□ 0.57
ITGA4-202ENST00000339307 PRAMEF13Q5VWM6 474 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 FRMPD2BQ6IN97 320 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 LRRC8AQ8IWT6 810 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 DTWD1Q8N5C7 304 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 OR2L3Q8NG85 312 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 YIPF2Q9BWQ6 316 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 WDR54Q9H977 334 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 ABCF3Q9NUQ8 709 aa18.6■□□□□ 0.57
ITGA4-202ENST00000339307 STOX2Q9P2F5 926 aaPredicted RBP18.6■□□□□ 0.57
ITGA4-202ENST00000339307 COPG1Q9Y678 874 aaKnown RBP18.6■□□□□ 0.57
ITGA4-202ENST00000339307 SHANK1Q9Y566 2161 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 LOC105369274A0A096LPK9 316 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 LOC102723532A0A0G2JNH3 316 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 H3BMM5 538 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 PRICKLE3O43900 615 aaPredicted RBP18.59■□□□□ 0.57
ITGA4-202ENST00000339307 SRPX2O60687 465 aaPredicted RBP18.59■□□□□ 0.57
ITGA4-202ENST00000339307 AVILO75366 819 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 FKBP9O95302 570 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 PAMP19021 973 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 CMPK1P30085 196 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 OCA2Q04671 838 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 COX15Q7KZN9 410 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 OR4N4Q8N0Y3 316 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 VPS50Q96JG6 964 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 BIRC8Q96P09 236 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 MRM3Q9HC36 420 aaKnown RBP18.59■□□□□ 0.57
ITGA4-202ENST00000339307 ZNF304Q9HCX3 659 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 HOMER3Q9NSC5 361 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 IL1RAPL1Q9NZN1 696 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 SAMD15Q9P1V8 674 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 NXT1Q9UKK6 140 aaKnown RBP18.59■□□□□ 0.57
ITGA4-202ENST00000339307 SOX13Q9UN79 622 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 ESPL1Q14674 2120 aa18.59■□□□□ 0.57
ITGA4-202ENST00000339307 RP1L1Q8IWN7 2480 aaPredicted RBP18.58■□□□□ 0.57
ITGA4-202ENST00000339307 NRP2O60462 931 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 ESR1P03372 595 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 TPSB2P20231 275 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 ARNTP27540 789 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 RPA3P35244 121 aaPredicted RBP18.58■□□□□ 0.57
ITGA4-202ENST00000339307 GCGRP47871 477 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 CDK16Q00536 496 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 GPS1Q13098 491 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 TPSAB1Q15661 275 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 HIF1AQ16665 826 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 TUBB8Q3ZCM7 444 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 ANKRD20A4Q4UJ75 823 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 AGAP7PQ5VUJ5 663 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 SUSD1Q6UWL2 747 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 IGFL3Q6UXB1 125 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 OR2A1Q8NGT9 310 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 LPGAT1Q92604 370 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 CABS1Q96KC9 395 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 CNDP1Q96KN2 507 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 AGAP4Q96P64 663 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 SPSB2Q99619 263 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 DPH7Q9BTV6 452 aa18.58■□□□□ 0.57
ITGA4-202ENST00000339307 CRB3Q9BUF7 120 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms