RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 RIMS1Q86UR5 1692 aaKnown RBP11.53□□□□□ -0.56
SHANK2-201ENST00000338508 TCRBV5S4A2TA0A5A2 114 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 TCAF2A6NFQ2 919 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 SLC38A8A6NNN8 435 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 JUNP05412 331 aaKnown RBP11.53□□□□□ -0.56
SHANK2-201ENST00000338508 GRM2Q14416 872 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 NTRK3Q16288 839 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 GRIK5Q16478 980 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 ALG10BQ5I7T1 473 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
SHANK2-201ENST00000338508 TCEANCQ8N8B7 351 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 NLGN4YQ8NFZ3 816 aaPredicted RBP11.53□□□□□ -0.56
SHANK2-201ENST00000338508 OR5J2Q8NH18 312 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 PGM2Q96G03 612 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 POLR2J2Q9GZM3 115 aaKnown RBP11.53□□□□□ -0.56
SHANK2-201ENST00000338508 NUDT4Q9NZJ9 180 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 WASF3Q9UPY6 502 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 CCNE2O96020 404 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 ATF6P18850 670 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 MLLT10P55197 1068 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 SLC10A7Q0GE19 358 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 DPYSQ14117 519 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 ZACNQ401N2 412 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 AADACL4Q5VUY2 407 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 ANKRD23Q86SG2 305 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 KREMEN2Q8NCW0 462 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 LRRC20Q8TCA0 184 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 ART4Q93070 314 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 ZNF717Q9BY31 904 aaPredicted RBP11.53□□□□□ -0.56
SHANK2-201ENST00000338508 LRRC4CQ9HCJ2 640 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 CRTAC1Q9NQ79 661 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 TAS2R7Q9NYW3 318 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 CDH22Q9UJ99 828 aa11.53□□□□□ -0.56
SHANK2-201ENST00000338508 M0R129 80 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 CXCR6O00574 342 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 SLC26A9Q7LBE3 791 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 CLNKQ7Z7G1 428 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 PRELID2Q8N945 189 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 ZNF709Q8N972 641 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 NOP16Q9Y3C1 178 aaKnown RBP11.52□□□□□ -0.56
SHANK2-201ENST00000338508 PLD2O14939 933 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 PCDH7O60245 1069 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A9O60656 530 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 OPN1SWP03999 348 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 CD48P09326 243 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A6P19224 532 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A1P22309 533 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A4P22310 534 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 GNRHRP30968 328 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A3P35503 534 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 SCARB2Q14108 478 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 FASTKD3Q14CZ7 662 aaKnown RBP11.52□□□□□ -0.56
SHANK2-201ENST00000338508 ARL13AQ5H913 290 aaPredicted RBP11.52□□□□□ -0.56
SHANK2-201ENST00000338508 PKP4Q99569 1192 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A7Q9HAW7 530 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A10Q9HAW8 530 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 UGT1A8Q9HAW9 530 aa11.52□□□□□ -0.56
SHANK2-201ENST00000338508 CORO1CQ9ULV4 474 aaPredicted RBP11.52□□□□□ -0.56
SHANK2-201ENST00000338508 PVALBP20472 110 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-201ENST00000338508 IFI44LQ53G44 452 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 C3orf33Q6P1S2 294 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 GJD3Q8N144 294 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 GATSQ8NAP1 163 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 ZNF649Q9BS31 505 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 S100A14Q9HCY8 104 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 hCG_1807616A0A1W2PRN6 198 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 C11orf98E9PRG8 122 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 VILLO15195 856 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 ADAMDEC1O15204 470 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 TACSTD2P09758 323 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 ALPIP09923 528 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 CLCNKAP51800 687 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 NFKB2Q00653 900 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 MTFR2Q6P444 385 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 PAQR7Q86WK9 346 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 PHF13Q86YI8 300 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-201ENST00000338508 NODALQ96S42 347 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 WDR26Q9H7D7 661 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 METTL21EPA6NDL7 271 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 SPATA31C2B4DYI2 1134 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 M0R2N6 131 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 HEXBP07686 556 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 OGNP20774 298 aaKnown RBP11.52□□□□□ -0.57
SHANK2-201ENST00000338508 ADRA1BP35368 520 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 HERV-K104P61576 105 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 LRRC37A5PQ49AS3 106 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 HGSNATQ68CP4 663 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 BBS12Q6ZW61 710 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 P2RY8Q86VZ1 359 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 XYLT1Q86Y38 959 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 COL21A1Q96P44 957 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 SLC35A5Q9BS91 424 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 IFT80Q9P2H3 777 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-201ENST00000338508 AASSQ9UDR5 926 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 ERI3O43414 337 aaKnown RBP11.52□□□□□ -0.57
SHANK2-201ENST00000338508 CST3P01034 146 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-201ENST00000338508 MMP14P50281 582 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 RORCP51449 518 aa11.52□□□□□ -0.57
SHANK2-201ENST00000338508 ZNF41P51814 821 aaPredicted RBP11.52□□□□□ -0.57
SHANK2-201ENST00000338508 FXYD6P3P58550 94 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms