RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TESMINQ9Y4I5 508 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF780BQ9Y6R6 833 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 GNA13Q14344 377 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 BNIPLQ7Z465 357 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SNRNP27Q8WVK2 155 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SLC22A12Q96S37 553 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 RPS6KB2Q9UBS0 482 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TTC34A8MYJ7 566 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 I6L893 689 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 UGT2B11O75310 529 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 HMGA1P17096 107 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 IFNGR2P38484 337 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 YAP1P46937 504 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SPINT3P49223 89 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TEAD4Q15561 434 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF423Q2M1K9 1284 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 USP39Q53GS9 565 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ATOH8Q96SQ7 321 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 COQ6Q9Y2Z9 468 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 NPIPB15A6NHN6 443 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 HNRNPCL2B2RXH8 293 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TNFRSF11BO00300 401 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SLC28A2O43868 658 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 DFNA5O60443 496 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SERPINB7O75635 380 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PTX3P26022 381 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PTPRRQ15256 657 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 OR7A2PQ8NGA2 310 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 OR5K1Q8NHB7 308 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TPT1P8Q9HAU6 139 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SLC9A8Q9Y2E8 581 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ANGPTL1O95841 491 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SMIM11AP58511 58 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PRAMEF14Q5SWL7 426 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PRAMEF13Q5VWM6 474 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ENPP7Q6UWV6 458 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TRIM74Q86UV6 250 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 FZD4Q9ULV1 537 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CCNDBP1O95273 360 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 MATN4O95460 622 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ZBTB11O95625 1053 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ENGP17813 658 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 RPS3P23396 243 aaKnown RBP eCLIP6.13□□□□□ -1.436e-7■■■■□ 19.9
PRKDC-202ENST00000338368 ZNF140P52738 457 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 LSM3P62310 102 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SP140Q13342 867 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PTGR1Q14914 329 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TRIM16LQ309B1 348 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 MPP7Q5T2T1 576 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 LIMS2Q7Z4I7 341 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ADGRG2Q8IZP9 1017 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 C1QTNF1Q9BXJ1 281 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 OR51B5Q9H339 312 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CXorf21Q9HAI6 301 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CCNB1IP1Q9NPC3 277 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 INTS7Q9NVH2 962 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TMEM98Q9Y2Y6 226 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 DLEC1Q9Y238 1755 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 H6PDO95479 791 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CAPN3P20807 821 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CMPK1P30085 196 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PGM2L1Q6PCE3 622 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 C16orf62Q7Z3J2 963 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 VANGL1Q8TAA9 524 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 MYRFLQ96LU7 910 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 EQTNQ9NQ60 294 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 KIAA1217Q5T5P2 1943 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 A0A0G2JN53 185 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 KRT87PA6NCN2 255 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 CREG1O75629 220 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 VIPR2P41587 438 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SEC13P55735 322 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 FBXW4P57775 412 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 OR4D2P58180 307 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ZNHIT3Q15649 155 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 LINC01599Q8WXQ3 324 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SORCS1Q8WY21 1168 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PCBD2Q9H0N5 130 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TRIM39Q9HCM9 518 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 FBXW2Q9UKT8 454 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PAIP2BQ9ULR5 123 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PCDHGB3Q9Y5G1 929 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RTTNQ86VV8 2226 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 BUD31P41223 144 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ABHD18Q0P651 414 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ATP1A4Q13733 1029 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PCBP2Q15366 365 aaKnown RBP eCLIP6.12□□□□□ -1.432e-6■■■■■ 35.5
PRKDC-202ENST00000338368 ZNF648Q5T619 568 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SVOPLQ8N434 492 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 C10orf53Q8N6V4 93 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 LCN9Q8WX39 176 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC9A6Q92581 669 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC45A3Q96JT2 553 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 FNDC11Q9BVV2 318 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SLC12A9Q9BXP2 914 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 HHATLQ9HCP6 504 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 GULP1Q9UBP9 304 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SEC14L3Q9UDX4 400 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PDE9AO76083 593 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 ABLIM3O94929 683 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms