RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SLC11A1P49279 550 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ARF5P84085 180 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 EPS8Q12929 822 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 TRAF3Q13114 568 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ADGRF1Q5T601 910 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 CES5AQ6NT32 575 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZCCHC8Q6NZY4 707 aaKnown RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZNF621Q6ZSS3 439 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 PCSK9Q8NBP7 692 aaKnown RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 CHDHQ8NE62 594 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 APOLD1Q96LR9 279 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 MYOCQ99972 504 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 C1QTNF3Q9BXJ4 246 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ADPRHL2Q9NX46 363 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 PCDHB14Q9Y5E9 798 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 PRSS21Q9Y6M0 314 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 TBKBP1A7MCY6 615 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 SCO1O75880 301 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 IL6P05231 212 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ATF6P18850 670 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 SMAD3P84022 425 aaKnown RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 KCNC4Q03721 635 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 PRKCZQ05513 592 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 BCL2L1Q07817 233 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 TSTA3Q13630 321 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 SPCS2Q15005 226 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 PCBP2Q15366 365 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■■□ 22
CDC42EP4-201ENST00000335793 SDE2Q6IQ49 451 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 HORMAD1Q86X24 394 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 CCDC103Q8IW40 242 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 TMEM132CQ8N3T6 1108 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 MCOLN3Q8TDD5 553 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 MYO19Q96H55 970 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 MAP6Q96JE9 813 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 TTPALQ9BTX7 342 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 C2orf49Q9BVC5 232 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 B3GNT4Q9C0J1 378 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 TNKS2Q9H2K2 1166 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 ELOVL2Q9NXB9 296 aa16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 TDRD15B5MCY1 1934 aaKnown RBP16.11■□□□□ 0.17
CDC42EP4-201ENST00000335793 RFXANKO14593 260 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 NDUFS2O75306 463 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 BCAS1O75363 584 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 RECQL5O94762 991 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 SCELO95171 688 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 HIST1H2AGP0C0S8 130 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 CR2P20023 1033 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 HIST1H2ADP20671 130 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 IGFBP5P24593 272 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 FCGRTP55899 365 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 PPP2R2BQ00005 443 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 DOK6Q6PKX4 331 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 RBM23Q86U06 439 aaKnown RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZDHHC21Q8IVQ6 265 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZBTB2Q8N680 514 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZNF548Q8NEK5 533 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 FBXO22Q8NEZ5 403 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 DBF4BQ8NFT6 615 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 MED30Q96HR3 178 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 HIST1H2AHQ96KK5 128 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 HIST1H2AJQ99878 128 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 H2AFJQ9BTM1 129 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZNF717Q9BY31 904 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 RUBCNLQ9H714 662 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 C1orf109Q9NX04 203 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 SCN3BQ9NY72 215 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 PNMA8BQ9ULN7 279 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 VPS4AQ9UN37 437 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 IFRD1O00458 451 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 PER2O15055 1255 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 STC2O76061 302 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 BCKDHAP12694 445 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 PFKLP17858 780 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 FSHRP23945 695 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 DCTP40126 519 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 RPIAP49247 311 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 HNRNPFP52597 415 aaKnown RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 RPS14P62263 151 aaKnown RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 BOP1Q14137 746 aaKnown RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 CTU2Q2VPK5 515 aaKnown RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 CERS6Q6ZMG9 384 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 CYP2U1Q7Z449 544 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 RNF180Q86T96 592 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 TMEM173Q86WV6 379 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 IFNL1Q8IU54 200 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 TTC30BQ8N4P2 665 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 ZNF540Q8NDQ6 660 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 TPD52L3Q96J77 140 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 CD244Q9BZW8 370 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 RMND5AQ9H871 391 aa16.1■□□□□ 0.17
CDC42EP4-201ENST00000335793 GLUD1P00367 558 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 ANXA5P08758 320 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 TTLL9Q3SXZ7 439 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 SUSD1Q6UWL2 747 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 ANKRD13BQ86YJ7 626 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 ISG20Q96AZ6 181 aaKnown RBP16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 INPP5KQ9BT40 448 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 EBPLQ9BY08 206 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 SLC25A37Q9NYZ2 338 aa16.09■□□□□ 0.17
CDC42EP4-201ENST00000335793 ABT1Q9ULW3 272 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms