RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CDH3P22223 829 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 ACRV1P26436 265 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 S100A3P33764 101 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 HPCAL1P37235 193 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 NCS1P62166 190 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 SLC8B1Q6J4K2 584 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 PLPP6Q8IY26 295 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 CDC26Q8NHZ8 85 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 GLMNQ92990 594 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 TAMM41Q96BW9 452 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 ARL15Q9NXU5 204 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 FAM8A1Q9UBU6 413 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 INTS6Q9UL03 887 aaKnown RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 PNMA8BQ9ULN7 279 aaPredicted RBP12□□□□□ -0.49
VPS33B-201ENST00000333371 CLEC4EQ9ULY5 219 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 PMF1-BGLAPU3KQ54 211 aa12□□□□□ -0.49
VPS33B-201ENST00000333371 C5orf42Q9H799 3197 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 RETP07949 1114 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 GABARAPL2P60520 117 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 DNASE1L3Q13609 305 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 NPTX1Q15818 432 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 TRIM16LQ309B1 348 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.99□□□□□ -0.49
VPS33B-201ENST00000333371 USP7Q93009 1102 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 APOLD1Q96LR9 279 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 ALPK1Q96QP1 1244 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 MAGEE1Q9HCI5 957 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 POLE4Q9NR33 117 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 CPQQ9Y646 472 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 KRBA1A5PL33 1030 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 FAM220BPB1ANY3 271 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 CLDN25C9JDP6 229 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 PRAMEF4O60810 478 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 MT-ND2P03891 347 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 SDC1P18827 310 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 ITIH1P19827 911 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 PSMB9P28065 219 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 VLDLRP98155 873 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 PAGE2BQ5JRK9 111 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 PRAMEF9Q5VWM5 478 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 ZCCHC8Q6NZY4 707 aaKnown RBP11.99□□□□□ -0.49
VPS33B-201ENST00000333371 CHST9Q7L1S5 443 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 SNX20Q7Z614 316 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 ANKRD13BQ86YJ7 626 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 CRIPAKQ8N1N5 446 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 GLB1L3Q8NCI6 653 aaPredicted RBP11.99□□□□□ -0.49
VPS33B-201ENST00000333371 GPR26Q8NDV2 337 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 PIK3C3Q8NEB9 887 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 OR7A2PQ8NGA2 310 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF347Q96SE7 839 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 NTMT1Q9BV86 223 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 TRPM5Q9NZQ8 1165 aa11.99□□□□□ -0.49
VPS33B-201ENST00000333371 GLYATL1P3A0A0U1RQE8 302 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 CLDN9O95484 217 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 NADKO95544 446 aaPredicted RBP11.98□□□□□ -0.49
VPS33B-201ENST00000333371 EBLN1P0CF75 366 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 ITGALP20701 1170 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 ITPKAP23677 461 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 RPIAP49247 311 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 SMAD3P84022 425 aaKnown RBP11.98□□□□□ -0.49
VPS33B-201ENST00000333371 GSTM4Q03013 218 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 MAD2L1Q13257 205 aaPredicted RBP11.98□□□□□ -0.49
VPS33B-201ENST00000333371 MAPK11Q15759 364 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 ATG9BQ674R7 924 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 CERS6Q6ZMG9 384 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 Q6ZPB1 254 aaPredicted RBP11.98□□□□□ -0.49
VPS33B-201ENST00000333371 TRIT1Q9H3H1 467 aaKnown RBP11.98□□□□□ -0.49
VPS33B-201ENST00000333371 SIRT5Q9NXA8 310 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 NAALAD2Q9Y3Q0 740 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 ORC6Q9Y5N6 252 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 RFXANKO14593 260 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 SLC16A6O15403 523 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 TRBC1P01850 177 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 CXCL10P02778 98 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 KCNC4Q03721 635 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 HSPA14Q0VDF9 509 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 EPS8Q12929 822 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 NIPAL1Q6NVV3 410 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 VRK3Q8IV63 474 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 RORBQ92753 470 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 PLD4Q96BZ4 506 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 IGSF21Q96ID5 467 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 SH3GL1Q99961 368 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
VPS33B-201ENST00000333371 KCNH6Q9H252 994 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 CWH43Q9H720 699 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 AKIP1Q9NQ31 210 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 DNMT3BQ9UBC3 853 aaKnown RBP11.98□□□□□ -0.49
VPS33B-201ENST00000333371 TRPS1Q9UHF7 1281 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF451Q9Y4E5 1061 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 OR51B4Q9Y5P0 310 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 BACE2Q9Y5Z0 518 aa11.98□□□□□ -0.49
VPS33B-201ENST00000333371 A0A096LPI6 279 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 NPIPB15A6NHN6 443 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 ERN1O75460 977 aaKnown RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 JRKO75564 520 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 BMP4P12644 408 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 HOXB9P17482 250 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms