RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 ANKRD7Q92527 254 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 RBBP8Q99708 897 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 MIPEPQ99797 713 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 SLC7A5P2Q9GIP4 190 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 PRORYQ9H606 182 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 CPNE5Q9HCH3 593 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 FAM60AQ9NP50 221 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 UTP6Q9NYH9 597 aaKnown RBP13.49□□□□□ -0.25
LIMS1-201ENST00000332345 LHX6Q9UPM6 363 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 PLCL2Q9UPR0 1127 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 PDE10AQ9Y233 779 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 MTO1Q9Y2Z2 717 aaKnown RBP13.49□□□□□ -0.25
LIMS1-201ENST00000332345 PCDHB3Q9Y5E6 796 aa13.49□□□□□ -0.25
LIMS1-201ENST00000332345 A0A1W2PPV9 198 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 E7ENX8 843 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 E7EQ34 232 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 K7ENP7 123 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 EFSO43281 561 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 CPNE3O75131 537 aaKnown RBP13.48□□□□□ -0.25
LIMS1-201ENST00000332345 CCNDBP1O95273 360 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 TIAF1O95411 115 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 TSPAN12O95859 305 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 NTRK1P04629 796 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 KLK3P07288 261 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-201ENST00000332345 HBQ1P09105 142 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 GRIA3P42263 894 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 TAP2Q03519 686 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 PRDX1Q06830 199 aaKnown RBP13.48□□□□□ -0.25
LIMS1-201ENST00000332345 ARHGAP40Q5TG30 622 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 INO80CQ6PI98 192 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-201ENST00000332345 SUSD1Q6UWL2 747 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 VASH2Q86V25 355 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 MCATQ8IVS2 390 aaKnown RBP13.48□□□□□ -0.25
LIMS1-201ENST00000332345 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 FAM20CQ8IXL6 584 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 OR2L3Q8NG85 312 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 OR1L3Q8NH93 324 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 DLG3Q92796 817 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 CYTH2Q99418 400 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 GPR22Q99680 433 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 ACAT2Q9BWD1 397 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 GPN2Q9H9Y4 310 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-201ENST00000332345 GPAMQ9HCL2 828 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 ADAMTS6Q9UKP5 1117 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 KLHL20Q9Y2M5 609 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 KLK4Q9Y5K2 254 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 AP1M2Q9Y6Q5 423 aa13.48□□□□□ -0.25
LIMS1-201ENST00000332345 TEX51A0A1B0GUA7 166 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 OR2B3O76000 313 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 C1QAP02745 245 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 ENO2P09104 434 aaPredicted RBP13.47□□□□□ -0.25
LIMS1-201ENST00000332345 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 STMN1P16949 149 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 ZNF37AP17032 561 aaPredicted RBP13.47□□□□□ -0.25
LIMS1-201ENST00000332345 CCND1P24385 295 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 PSMB5P28074 263 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 IMPA1P29218 277 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 STAT5AP42229 794 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 PGGT1BP53609 377 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 AP1S2P56377 157 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 ABATP80404 500 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 THEMIS2Q5TEJ8 643 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 FCRL6Q6DN72 434 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 TLDC1Q6P9B6 456 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 TMEM207Q6UWW9 146 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 PPFIBP2Q8ND30 876 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 SNRNP27Q8WVK2 155 aaKnown RBP13.47□□□□□ -0.25
LIMS1-201ENST00000332345 ATL1Q8WXF7 558 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 CLIP3Q96DZ5 547 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 LRFN5Q96NI6 719 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 PCBD2Q9H0N5 130 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 ACTR5Q9H9F9 607 aaPredicted RBP13.47□□□□□ -0.25
LIMS1-201ENST00000332345 L2HGDHQ9H9P8 463 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 MRPS30Q9NP92 439 aaKnown RBP13.47□□□□□ -0.25
LIMS1-201ENST00000332345 LHX9Q9NQ69 397 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 IRAK4Q9NWZ3 460 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 EURLQ9NYK6 297 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 NINJ2Q9NZG7 142 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 ANKMY1Q9P2S6 941 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 SNX7Q9UNH6 387 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 NOVA2Q9UNW9 492 aaKnown RBP13.47□□□□□ -0.25
LIMS1-201ENST00000332345 HEATR5BQ9P2D3 2071 aa13.47□□□□□ -0.25
LIMS1-201ENST00000332345 LOC101059948A0A1B0GTJ6 334 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 ZNF749O43361 778 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 SRPX2O60687 465 aaPredicted RBP13.46□□□□□ -0.25
LIMS1-201ENST00000332345 LIFP15018 202 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 TCN2P20062 427 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 HRH2P25021 359 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 GABRA4P48169 554 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 TCTE1Q5JU00 501 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 ICE2Q659A1 982 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 RNF31Q96EP0 1072 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 CRELD1Q96HD1 420 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 DPH7Q9BTV6 452 aa13.46□□□□□ -0.25
LIMS1-201ENST00000332345 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
LIMS1-201ENST00000332345 CDC42EP4Q9H3Q1 356 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms