RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 OR56A3Q8NH54 315 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 ATL1Q8WXF7 558 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 ALKBH8Q96BT7 664 aaKnown RBP25.02■■□□□ 1.6
SMDT1-201ENST00000331479 TRAPPC9Q96Q05 1148 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 CCDC177Q9NQR7 707 aaPredicted RBP25.02■■□□□ 1.6
SMDT1-201ENST00000331479 TAC3Q9UHF0 121 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 LOXL2Q9Y4K0 774 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 PCDHB11Q9Y5F2 797 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 A0A0J9YY10 115 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 MTHFD2P13995 350 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CSTF2P33240 577 aaKnown RBP eCLIP25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CASP8Q14790 479 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 FBXO48Q5FWF7 155 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CEP85LQ5SZL2 805 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 ERMP1Q7Z2K6 904 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 AGBL5Q8NDL9 886 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 OR2L3Q8NG85 312 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 SLC41A2Q96JW4 573 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CMKLR1Q99788 373 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 SGPP1Q9BX95 441 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 INTS7Q9NVH2 962 aaKnown RBP25.01■■□□□ 1.59
SMDT1-201ENST00000331479 OCIAD1Q9NX40 245 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CD274Q9NZQ7 290 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 TMEM216Q9P0N5 145 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 SATB2Q9UPW6 733 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 PCM1Q15154 2024 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CCDC187A0A096LP49 1063 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 TAPBPO15533 448 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CCL4P13236 92 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 NELFEP18615 380 aaKnown RBP25.01■■□□□ 1.59
SMDT1-201ENST00000331479 KRT4P19013 534 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 HNMTP50135 292 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 ZIC1Q15915 447 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 C3orf38Q5JPI3 329 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 LRIG3Q6UXM1 1119 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 TRABD2AQ86V40 505 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 CARFQ8N187 725 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 C4orf33Q8N1A6 199 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 PDPRQ8NCN5 879 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 SCYL1Q96KG9 808 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 TSNARE1Q96NA8 513 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 XPR1Q9UBH6 696 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 NEUROG3Q9Y4Z2 214 aa25.01■■□□□ 1.59
SMDT1-201ENST00000331479 ADAMTS20P59510 1910 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 AKAP13Q12802 2813 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 CCDC189A1A4V9 331 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 SUPT3HB4E1H0 165 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 SUPT3HO75486 399 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 ZBTB11O95625 1053 aaPredicted RBP25■■□□□ 1.59
SMDT1-201ENST00000331479 SH3BP2P78314 561 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 KCNAB1Q14722 419 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 PTCHD3Q3KNS1 767 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 THEMIS2Q5TEJ8 643 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 C16orf46Q6P387 395 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 CDHR3Q6ZTQ4 885 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 FBXO39Q8N4B4 442 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 TMEM151AQ8N4L1 468 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 ESAMQ96AP7 390 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 TMEM79Q9BSE2 394 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 ARGLU1Q9NWB6 273 aaPredicted RBP25■■□□□ 1.59
SMDT1-201ENST00000331479 NUDT4Q9NZJ9 180 aa25■■□□□ 1.59
SMDT1-201ENST00000331479 TK2O00142 265 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 RBP1P09455 135 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 SBK3P0C264 359 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 FGF3P11487 239 aaPredicted RBP24.99■■□□□ 1.59
SMDT1-201ENST00000331479 ITIH1P19827 911 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 MAGP20916 626 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 GDF5P43026 501 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 HSD11B2P80365 405 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 CDKL4Q5MAI5 379 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 PRAMEF13Q5VWM6 474 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 ICE2Q659A1 982 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 SULT1C3Q6IMI6 304 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 CAPN13Q6MZZ7 669 aaPredicted RBP24.99■■□□□ 1.59
SMDT1-201ENST00000331479 FOXR1Q6PIV2 292 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 FAM129CQ86XR2 697 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 KMT5CQ86Y97 462 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 WDR36Q8NI36 951 aaKnown RBP24.99■■□□□ 1.59
SMDT1-201ENST00000331479 PRR11Q96HE9 360 aaPredicted RBP24.99■■□□□ 1.59
SMDT1-201ENST00000331479 OR4K3Q96R72 315 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 CPSF2Q9P2I0 782 aaKnown RBP24.99■■□□□ 1.59
SMDT1-201ENST00000331479 PTBP2Q9UKA9 531 aaKnown RBP24.99■■□□□ 1.59
SMDT1-201ENST00000331479 SH2B3Q9UQQ2 575 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 MSRB2Q9Y3D2 182 aa24.99■■□□□ 1.59
SMDT1-201ENST00000331479 IGKV1-8A0A0C4DH67 115 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 EFCAB7A8K855 629 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 SYCE1LA8MT33 242 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 MAP2K7O14733 419 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 PLD2O14939 933 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 ETV5P41161 510 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 SLC6A12P48065 614 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 SLC18A2Q05940 514 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 PRDX1Q06830 199 aaKnown RBP24.98■■□□□ 1.59
SMDT1-201ENST00000331479 EIF3IQ13347 325 aaKnown RBP24.98■■□□□ 1.59
SMDT1-201ENST00000331479 LCA5Q86VQ0 697 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 D2HGDHQ8N465 521 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 BMPERQ8N8U9 685 aa24.98■■□□□ 1.59
SMDT1-201ENST00000331479 C19orf47Q8N9M1 422 aaKnown RBP24.98■■□□□ 1.59
SMDT1-201ENST00000331479 MRPL57Q9BQC6 102 aaKnown RBP24.98■■□□□ 1.59
SMDT1-201ENST00000331479 FAM60AQ9NP50 221 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms