RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 MICU2Q8IYU8 434 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 BTN2A2Q8WVV5 523 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 FBXL8Q96CD0 374 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 SLC47A1Q96FL8 570 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 MED8Q96G25 268 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 MTERF1Q99551 399 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 CPPED1Q9BRF8 314 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 UGT2B28Q9BY64 529 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 KCNH6Q9H252 994 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 CD320Q9NPF0 282 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 MARK1Q9P0L2 795 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 A0A096LPI6 279 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 H0Y858 1186 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 TLL1O43897 1013 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 SH3BGRLO75368 114 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 ERN1O75460 977 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PRSS23O95084 383 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 MYCLP1P12525 358 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PRPH2P23942 346 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PCSK6P29122 969 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PTPN6P29350 595 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 MMP12P39900 470 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 TUBA4AP68366 448 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 SF1Q15637 639 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 LRIF1Q5T3J3 769 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 BORAQ6PGQ7 559 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 DPPA4Q7L190 304 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 PARS2Q7L3T8 475 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 NECAB2Q7Z6G3 386 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 THOC6Q86W42 341 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 TNIP2Q8NFZ5 429 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 GLYATL1Q969I3 302 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 TMEM159Q96B96 161 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 AP2M1Q96CW1 435 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 MAN2B2Q9Y2E5 1009 aa14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 RANBP2P49792 3224 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-201ENST00000331433 KPNA3O00505 521 aaPredicted RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 CYP17A1P05093 508 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 SLC5A2P31639 672 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 DGKGP49619 791 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 PPP1R8Q12972 351 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 SLC14A1Q13336 389 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 NAE1Q13564 534 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 ADNP2Q6IQ32 1131 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 ABRAXAS1Q6UWZ7 409 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 LIPIQ6XZB0 460 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 PATL1Q86TB9 770 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 RASGRP3Q8IV61 690 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 HS3ST5Q8IZT8 346 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 CLEC4FQ8N1N0 589 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 TMEM132CQ8N3T6 1108 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 ST13P5Q8NFI4 369 aaPredicted RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 OR7A2PQ8NGA2 310 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 OR10Q1Q8NGQ4 319 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 NETO1Q8TDF5 533 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 FAM120BQ96EK7 910 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 ITCHQ96J02 903 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 RMND5AQ9H871 391 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 DDX18Q9NVP1 670 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 COQ6Q9Y2Z9 468 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 XYLBO75191 536 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 PSIP1O75475 530 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 CREG1O75629 220 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 SCELO95171 688 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 CST1P01037 141 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 MAPK1P28482 360 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 PDHA2P29803 388 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 GZMMP51124 257 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 ALDH3A2P51648 485 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 ADARB1P78563 741 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 CAMK1Q14012 370 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 DOC2AQ14183 400 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 PON2Q15165 354 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 ATG9BQ674R7 924 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 AGTRAPQ6RW13 159 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 USP51Q70EK9 711 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 TRIM74Q86UV6 250 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 GPR180Q86V85 440 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 CALHM3Q86XJ0 350 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 CDC26Q8NHZ8 85 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 TESCQ96BS2 214 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 TIFAQ96CG3 184 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 RAD9AQ99638 391 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 STOX2Q9P2F5 926 aaPredicted RBP14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 TMED5Q9Y3A6 229 aa14.42□□□□□ -0.1
CLCNKA-201ENST00000331433 A0A087WXM4 84 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 RFXANKO14593 260 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 BMP10O95393 424 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 SLC16A8O95907 504 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 SERPINA1P01009 418 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 ALBP02768 609 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 ALPLP05186 524 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 CISD3P0C7P0 127 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 HOXB9P17482 250 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 YAP1P46937 504 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 NRIP1P48552 1158 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 TMEM115Q12893 351 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 DAG1Q14118 895 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 TMEM220Q6QAJ8 160 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 ZNF551Q7Z340 670 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms