RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PTPN2P17706 415 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 CD22P20273 847 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 IST1P53990 364 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 PGS1Q32NB8 556 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 ZBED5Q49AG3 693 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.15□□□□□ -0.14
TPM3-206ENST00000330188 NOXRED1Q6NXP6 359 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 ZDHHC13Q8IUH4 622 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 SLC22A15Q8IZD6 547 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 NETO1Q8TDF5 533 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 NCLNQ969V3 563 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 MAGEB10Q96LZ2 347 aaPredicted RBP14.15□□□□□ -0.14
TPM3-206ENST00000330188 MUS81Q96NY9 551 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 MTG2Q9H4K7 406 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 TBC1D14Q9P2M4 693 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 WNT6Q9Y6F9 365 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 ZBBXA8MT70 800 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 G3V2T6 193 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 KIAA0355O15063 1070 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 PSIP1O75475 530 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 PCSK2P16519 638 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 CALRP27797 417 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 SHMT2P34897 504 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 ESRRGP62508 458 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 LAPTM5Q13571 262 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 KCNC3Q14003 757 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 CCNYL2Q5T2Q4 361 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 LIPJQ5W064 366 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 OR4F3Q6IEY1 312 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 MSANTD1Q6ZTZ1 278 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 FKBP9P1Q75LS8 142 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 GPR180Q86V85 440 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 ERI1Q8IV48 349 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 TIFAQ96CG3 184 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 ZSCAN5AQ9BUG6 496 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 MAGIXQ9H6Y5 334 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 FAM8A1Q9UBU6 413 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 HCFC2Q9Y5Z7 792 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 WNT9AO14904 365 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 PER2O15055 1255 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 UGDHO60701 494 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 SERPINA1P01009 418 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 MYCLP1P12525 358 aaPredicted RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 HNRNPFP52597 415 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 IRF8Q02556 426 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 ABHD18Q0P651 414 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 CSTF3Q12996 717 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 ZNF551Q7Z340 670 aaPredicted RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 TECPR1Q7Z6L1 1165 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 RAVER1Q8IY67 606 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 MRPL43Q8N983 215 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 CSGALNACT1Q8TDX6 532 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 BTN2A2Q8WVV5 523 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 GFM2Q969S9 779 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 SDCCAG3Q96C92 435 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 REXO5Q96IC2 774 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 PAWRQ96IZ0 340 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 RDH12Q96NR8 316 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 OSBPL10Q9BXB5 764 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 EBPLQ9BY08 206 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 LIN28AQ9H9Z2 209 aaKnown RBP14.14□□□□□ -0.15
TPM3-206ENST00000330188 SMURF2Q9HAU4 748 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 MARK1Q9P0L2 795 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 IL36AQ9UHA7 158 aa14.14□□□□□ -0.15
TPM3-206ENST00000330188 RFXANKO14593 260 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 CLGNO14967 610 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 TSPAN6O43657 245 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 IL1RNP18510 177 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 YAP1P46937 504 aaKnown RBP14.13□□□□□ -0.15
TPM3-206ENST00000330188 HLCSP50747 726 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 CTSCP53634 463 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 NTHL1P78549 312 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 PPP2R2BQ00005 443 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 ABRQ12979 859 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 MTAPQ13126 283 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 SLC14A1Q13336 389 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 AP1ARQ63HQ0 302 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 DPPA4Q7L190 304 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 THOC6Q86W42 341 aaKnown RBP14.13□□□□□ -0.15
TPM3-206ENST00000330188 CLVS1Q8IUQ0 354 aaPredicted RBP14.13□□□□□ -0.15
TPM3-206ENST00000330188 HS3ST5Q8IZT8 346 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 SVOPLQ8N434 492 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 LILRA3Q8N6C8 439 aaPredicted RBP14.13□□□□□ -0.15
TPM3-206ENST00000330188 RASGEF1AQ8N9B8 481 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 WDR20Q8TBZ3 569 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 FOXJ1Q92949 421 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 ZSWIM3Q96MP5 696 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 TOR3AQ9H497 397 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 C11orf49Q9H6J7 331 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 RAD18Q9NS91 495 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 USE1Q9NZ43 259 aa14.13□□□□□ -0.15
TPM3-206ENST00000330188 LAMA2P24043 3122 aaKnown RBP14.13□□□□□ -0.15
TPM3-206ENST00000330188 E7EQ34 232 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 QSOX1O00391 747 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 SYN1P17600 705 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 MAP4P27816 1152 aaKnown RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 NNMTP40261 264 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 KIR3DL1P43629 444 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 CTBSQ01459 385 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms