RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.32□□□□□ -1.24
TRIM49-201ENST00000329758 KIF25Q9UIL4 384 aa7.32□□□□□ -1.24
TRIM49-201ENST00000329758 USP18Q9UMW8 372 aa7.32□□□□□ -1.24
TRIM49-201ENST00000329758 SLC45A1Q9Y2W3 748 aa7.32□□□□□ -1.24
TRIM49-201ENST00000329758 ORC6Q9Y5N6 252 aa7.32□□□□□ -1.24
TRIM49-201ENST00000329758 WDR27A2RRH5 827 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 SLC35F4A4IF30 521 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 HNRNPCL2B2RXH8 293 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 NT5C1B-RDH14C9J2C7 533 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 MED7O43513 233 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 PSIP1O75475 530 aaKnown RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 ENDOD1O94919 500 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 EFNA1P20827 205 aaPredicted RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 CTGFP29279 349 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 CCR10P46092 362 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 BRCC3P46736 316 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 RAB13P51153 203 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 HUNKP57058 714 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 RRAS2P62070 204 aaPredicted RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 FKBP1BP68106 108 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 IRF9Q00978 393 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 KEAP1Q14145 624 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 TBCEQ15813 527 aaPredicted RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 SMYD5Q6GMV2 418 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 PYROXD2Q8N2H3 581 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 TSPEARQ8WU66 669 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 KHSRPQ92945 711 aaKnown RBP eCLIP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 WNT8BQ93098 351 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 CERS2Q96G23 380 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 NPAS1Q99742 590 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 TTPALQ9BTX7 342 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 NT5C1AQ9BXI3 368 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 NFKBIZQ9BYH8 718 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 SRRQ9GZT4 340 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 PPIL3Q9H2H8 161 aaKnown RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 ABHD16BQ9H3Z7 469 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 ASB7Q9H672 318 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 CD274Q9NZQ7 290 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 MAP10Q9P2G4 905 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 DNAJB9Q9UBS3 223 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 ZFR2Q9UPR6 939 aaKnown RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 PCDHB5Q9Y5E4 795 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 TIMM13Q9Y5L4 95 aaPredicted RBP7.31□□□□□ -1.24
TRIM49-201ENST00000329758 V9GYH0 126 aa7.31□□□□□ -1.24
TRIM49-201ENST00000329758 A0A0A6YYJ9 748 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 A0A0J9YYE9 177 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 A0A1W2PQ09 198 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 C2CD4BA6NLJ0 364 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 MYL12BO14950 172 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 INPPL1O15357 1258 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 TSC22D2O75157 780 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 VPS26AO75436 327 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 MATN4O95460 622 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 HOXD8P13378 290 aaPredicted RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 SYN1P17600 705 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 MYL12AP19105 171 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 GPX3P22352 226 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 GADD45AP24522 165 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 CSRP3P50461 194 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 AKR1D1P51857 326 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 HK3P52790 923 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 LIMK1P53667 647 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 DNAJB13P59910 316 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 RPP38P78345 283 aaKnown RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 GRIK2Q13002 908 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 IRF3Q14653 427 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 GRM7Q14831 915 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 POU4F3Q15319 338 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 ZNF124Q15973 351 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 FAM110CQ1W6H9 321 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 IQCCQ4KMZ1 466 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 GPR158Q5T848 1215 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 CNSTQ6PJW8 725 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 KDELC1Q6UW63 502 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 C11orf96Q7Z7L8 435 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 STX12Q86Y82 276 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 FUNDC1Q8IVP5 155 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 OR6M1Q8NGM8 313 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 CNIH3Q8TBE1 160 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 LPPQ93052 612 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 EMID1Q96A84 441 aaPredicted RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 PYCR2Q96C36 320 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 LRRC58Q96CX6 371 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 C11orf24Q96F05 449 aaPredicted RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 QKIQ96PU8 341 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 SLC9A7Q96T83 725 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 PARK7Q99497 189 aaKnown RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 GAL3ST1Q99999 423 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 SPOCK3Q9BQ16 436 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 ARHGAP39Q9C0H5 1083 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 CLEC4MQ9H2X3 399 aaPredicted RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 PIGUQ9H490 435 aa7.3□□□□□ -1.24
TRIM49-201ENST00000329758 DHX35Q9H5Z1 703 aaKnown RBP7.3□□□□□ -1.24
TRIM49-201ENST00000329758 TASP1Q9H6P5 420 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms