RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 WWOXQ9NZC7 414 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 ASF1AQ9Y294 204 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 TMEM131Q92545 1883 aa18.2■□□□□ 0.5
EXOSC3-201ENST00000327304 LOC100653049A0A140TA62 436 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 A0A1B0GTL3 188 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 SDC3O75056 442 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 KRT34O76011 436 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 C1orf105O95561 183 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 OTCP00480 354 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 CATP04040 527 aaKnown RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 CYP2A7P20853 494 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 GGT5P36269 586 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 MAPK9P45984 424 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 CYLC2Q14093 348 aaPredicted RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 ZRSR2Q15696 482 aaKnown RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 DUOXA1Q1HG43 343 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 WASH2PQ6VEQ5 465 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 ZNF548Q8NEK5 533 aaPredicted RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 KCNA7Q96RP8 456 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 TMEM79Q9BSE2 394 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 TUBB1Q9H4B7 451 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 NOL11Q9H8H0 719 aaKnown RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 AKTIPQ9H8T0 292 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 WASH6PQ9NQA3 447 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 IMP3Q9NV31 184 aaKnown RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 PCOLCE2Q9UKZ9 415 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 G3BP2Q9UN86 482 aaKnown RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 LAMA1P25391 3075 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 GPR179Q6PRD1 2367 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 A8MUI8 341 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 K7EPI3 171 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 OR7A17O14581 309 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 HIST1H2AGP0C0S8 130 aaPredicted RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 HIST1H2ADP20671 130 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 PRDX3P30048 256 aaKnown RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 PIK3CGP48736 1102 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 HSPA7P48741 367 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 HNRNPKP61978 463 aaKnown RBP eCLIP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 GRIK2Q13002 908 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 MAPRE2Q15555 327 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 RPE65Q16518 533 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 C18orf21Q32NC0 220 aaPredicted RBP18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 ABRAXAS1Q6UWZ7 409 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 SFTPA2Q8IWL1 248 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 DDIASQ8IXT1 998 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 MCOLN3Q8TDD5 553 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 HIST1H2AHQ96KK5 128 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 HIST1H2AJQ99878 128 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 H2AFJQ9BTM1 129 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 CAPN10Q9HC96 672 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 ARL15Q9NXU5 204 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 OPTCQ9UBM4 332 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 SPASTQ9UBP0 616 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 BAIAP2L1Q9UHR4 511 aa18.19■□□□□ 0.5
EXOSC3-201ENST00000327304 ARHGEF17Q96PE2 2063 aaPredicted RBP18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 DMDP11532 3685 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 PIAS2O75928 621 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 EPN2O95208 641 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 F3P13726 295 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 MAP4P27816 1152 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 DPP6P42658 865 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 HNMTP50135 292 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 AP1S2P56377 157 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 ERVPABLB-1P60509 514 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 ELOCQ15369 112 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 ZC3H14Q6PJT7 736 aaKnown RBP18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 SNX32Q86XE0 403 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 PRSS33Q8NF86 280 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 OR52B6Q8NGF0 335 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 CEP76Q8TAP6 659 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 MARK4Q96L34 752 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 IPPKQ9H8X2 491 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 UCKL1Q9NWZ5 548 aa18.18■□□□□ 0.5
EXOSC3-201ENST00000327304 TRBV23OR9-2A0A075B6M9 112 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 PRAMEF33A0A0G2JMD5 474 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 ATP6AP2A0A1C7CYW4 349 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 PABPN1LA6NDY0 278 aaKnown RBP18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 AQP9O43315 295 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 ATP6AP2O75787 350 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 OR4F21O95013 312 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 MTHFD1P11586 935 aaKnown RBP18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 LBPP18428 481 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 HALP42357 657 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 PRKG2Q13237 762 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 CUL3Q13618 768 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 SHBQ15464 509 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 CCDC6Q16204 474 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 XKR7Q5GH72 579 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 OGFOD2Q6N063 350 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 RABEPKQ7Z6M1 372 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 SCUBE1Q8IWY4 988 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 FBXO15Q8NCQ5 510 aaPredicted RBP18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 OR5K2Q8NHB8 316 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 PATE1Q8WXA2 126 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 LOXL4Q96JB6 756 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 PKP4Q99569 1192 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 ELF4Q99607 663 aaPredicted RBP18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 SMOC1Q9H4F8 434 aa18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 ZNF624Q9P2J8 865 aaPredicted RBP18.17■□□□□ 0.5
EXOSC3-201ENST00000327304 POLG2Q9UHN1 485 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms