RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 EPHA2P29317 976 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 IDUAP35475 653 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 SOAT1P35610 550 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 CRATP43155 626 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 RELAQ04206 551 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 EMX1Q04741 257 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 ATP13A5Q4VNC0 1218 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 RUNDC3AQ59EK9 446 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 OR2T5Q6IEZ7 315 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 Q6ZPB1 254 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 MSRB3Q8IXL7 192 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 NXPE1Q8N323 547 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 OR2T29Q8NH02 315 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 MAL2Q969L2 176 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 ITFG2Q969R8 447 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 TUBA1CQ9BQE3 449 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 KCTD5Q9NXV2 234 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 YIPF1Q9Y548 306 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 MGAT4DA6NG13 374 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 ERN1O75460 977 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 VNN2O95498 520 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 DLGAP3O95886 979 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 FABP3P05413 133 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 EBLN1P0CF75 366 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 RECQLP46063 649 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 CD300CQ08708 224 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 CDK5R2Q13319 367 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 TOP3AQ13472 1001 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 IRF5Q13568 498 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF846Q147U1 533 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 IRAK1BP1Q5VVH5 260 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 SERPINA13PQ6UXR4 307 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 DNAJB7Q7Z6W7 309 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 GPR26Q8NDV2 337 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 BCL7CQ8WUZ0 217 aaPredicted RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 SCAMP4Q969E2 229 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 SH3KBP1Q96B97 665 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 KCNC2Q96PR1 638 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 P2RY12Q9H244 342 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 KAT8Q9H7Z6 458 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 DCAF13Q9NV06 445 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 RNF186Q9NXI6 227 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 VNN3Q9NY84 501 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 CFAP97Q9P2B7 532 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 SAMD4AQ9UPU9 718 aaKnown RBP12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 TRIM17Q9Y577 477 aa12.55□□□□□ -0.4
HMGCS1-201ENST00000325110 NPIPB15A6NHN6 443 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 ANKRD28O15084 1053 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 RGS10O43665 173 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SEC14L2O76054 403 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 TRBC1P01850 177 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 ACRV1P26436 265 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 GABRR2P28476 465 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 MAPK1P28482 360 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 AP1S1P61966 158 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 CARD16Q5EG05 197 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 LMNTD1Q8N9Z9 388 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 PDPRQ8NCN5 879 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 FOXJ1Q92949 421 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SPATA17Q96L03 361 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 C1QTNF3Q9BXJ4 246 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SLC32A1Q9H598 525 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 EXOSC4Q9NPD3 245 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 TMEM189-UBE2V1I3L0A0 370 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 ZSCAN9O15535 394 aaPredicted RBP12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 LCKP06239 509 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 PHC1P78364 1004 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 PPP2R2BQ00005 443 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 NAE1Q13564 534 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 CYP4Z1Q86W10 505 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SYTL1Q8IYJ3 562 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 CMTM8Q8IZV2 173 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 ISG20Q96AZ6 181 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 HSH2DQ96JZ2 352 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 HERC2P3Q9BVR0 1158 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 GORASP2Q9H8Y8 452 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 MAGEE1Q9HCI5 957 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 CDH7Q9ULB5 785 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SAP18O00422 153 aaKnown RBP12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 VIPP01282 170 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SELPP16109 830 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 CD36P16671 472 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 SDC1P18827 310 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 NSG1P42857 185 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 FAM210AQ96ND0 272 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 ITM2CQ9NQX7 267 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 IMPAD1Q9NX62 359 aa12.54□□□□□ -0.4
HMGCS1-201ENST00000325110 MAGEB17A8MXT2 336 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 M0R129 80 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CPNE6O95741 557 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 CYP2A7P20853 494 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 STARD3Q14849 445 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 HKDC1Q2TB90 917 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 RFX4Q33E94 735 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 MCFD2Q8NI22 146 aa12.53□□□□□ -0.4
HMGCS1-201ENST00000325110 ADAMTS16Q8TE57 1224 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms