RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 LRIG1Q96JA1 1093 aa15.36■□□□□ 0.05
SMARCD2-202ENST00000323347 VPS35Q96QK1 796 aa15.36■□□□□ 0.05
SMARCD2-202ENST00000323347 ABCG8Q9H221 673 aa15.36■□□□□ 0.05
SMARCD2-202ENST00000323347 SLC22A14Q9Y267 594 aa15.36■□□□□ 0.05
SMARCD2-202ENST00000323347 PLXNA2O75051 1894 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 PABPN1LA6NDY0 278 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 NEDD8-MDP1E9PL57 170 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 PER2O15055 1255 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 BNIP3LO60238 219 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 RECQL5O94762 991 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 PRKD3O94806 890 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 CPNE6O95741 557 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 CST1P01037 141 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 IMPDH2P12268 514 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TYRP14679 529 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 MAGEA2P43356 314 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 MAGEA8P43361 318 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 NEK2P51955 445 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 GRSF1Q12849 480 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 E2F2Q14209 437 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 ZNF77Q15935 545 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 OTUD3Q5T2D3 398 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TMEM215Q68D42 235 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 NOXRED1Q6NXP6 359 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TECPR1Q7Z6L1 1165 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 STK32CQ86UX6 486 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 GPR180Q86V85 440 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 ADHFE1Q8IWW8 467 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 RAVER1Q8IY67 606 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 EID3Q8N140 333 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TERB1Q8NA31 727 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 CLHC1Q8NHS4 586 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 FBXO30Q8TB52 745 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 FAM81AQ8TBF8 368 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 WDR20Q8TBZ3 569 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 OTUB2Q96DC9 234 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 FAM120BQ96EK7 910 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 C11orf24Q96F05 449 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 MUS81Q96NY9 551 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 ZSCAN5AQ9BUG6 496 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TDP1Q9NUW8 608 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 FBXO10Q9UK96 956 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 GMEB1Q9Y692 573 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 UPK3BL1B0FP48 263 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 UPK3BL2E5RIL1 263 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 KIAA0355O15063 1070 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 SEC24DO94855 1032 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 CDK4P11802 303 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 HSD3B1P14060 373 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 PTPN2P17706 415 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 HSD3B2P26439 372 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 DCKP27707 260 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 MAPK9P45984 424 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 RECQLP46063 649 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 SRSF11Q05519 484 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 ZC3H12BQ5HYM0 836 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 RBM48Q5RL73 367 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 GCNT7Q6ZNI0 430 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 DPPA4Q7L190 304 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 DET1Q7L5Y6 550 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 GPR155Q7Z3F1 870 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 SERPINA11Q86U17 422 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TRIM74Q86UV6 250 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TRIM73Q86UV7 250 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 PHACTR4Q8IZ21 702 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 ZCCHC7Q8N3Z6 543 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 OR5K1Q8NHB7 308 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 ISOC1Q96CN7 298 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TCEAL4Q96EI5 215 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 PYURFQ96I23 114 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 RBM4BQ9BQ04 359 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 INPP5KQ9BT40 448 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 RBM4Q9BWF3 364 aaKnown RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 SOX17Q9H6I2 414 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 SPATA6Q9NWH7 488 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 FAM118AQ9NWS6 357 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 HCFC1R1Q9NWW0 138 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 IFT80Q9P2H3 777 aaPredicted RBP15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 ATXN10Q9UBB4 475 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 CD84Q9UIB8 345 aa15.35■□□□□ 0.05
SMARCD2-202ENST00000323347 TRIM43BA6NCK2 446 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 H0YIV9 168 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 SCN2BO60939 215 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 PCNAP12004 261 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 CHIT1Q13231 466 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 TEAD2Q15562 447 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 LDLRAP1Q5SW96 308 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 ZNF773Q6PK81 442 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 Q6ZVL8 140 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 CYP2U1Q7Z449 544 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 THAP5Q7Z6K1 395 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 RBM12BQ8IXT5 1001 aaKnown RBP15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 CHPFQ8IZ52 775 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 CLEC4FQ8N1N0 589 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 C10orf111Q8N326 155 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 OR8J2Q8NGG1 315 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 NETO1Q8TDF5 533 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 BTN2A2Q8WVV5 523 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 ATL1Q8WXF7 558 aa15.34■□□□□ 0.05
SMARCD2-202ENST00000323347 ELMO1Q92556 727 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms