RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ITPKAP23677 461 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 SHMT2P34897 504 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 CCR2P41597 374 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 KIR3DL1P43629 444 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 PFN3P60673 137 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 ABRQ12979 859 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 HSD11B1LQ7Z5J1 315 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 ADIPOR2Q86V24 386 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 ATL1Q8WXF7 558 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 PYURFQ96I23 114 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 APOLD1Q96LR9 279 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 FAM83CQ9BQN1 747 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 FAM118AQ9NWS6 357 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 ERVW-1Q9UQF0 538 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 MAGED1Q9Y5V3 778 aaPredicted RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 EVPLLA8MZ36 301 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 JUNBP17275 347 aaPredicted RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 MAP4P27816 1152 aaKnown RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 VEGFBP49765 207 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 EPHA5P54756 1037 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 HPCAP84074 193 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 IRF8Q02556 426 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 SRSF11Q05519 484 aaKnown RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 DCTN2Q13561 401 aaKnown RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 ARHGAP15Q53QZ3 475 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 BROXQ5VW32 411 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 NETO1Q8TDF5 533 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 HDAC2Q92769 488 aaKnown RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 METTL2AQ96IZ6 378 aaKnown RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 ZSCAN5AQ9BUG6 496 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 LIN28AQ9H9Z2 209 aaKnown RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 SPHK2Q9NRA0 654 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 TMEM9Q9P0T7 183 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 TBC1D14Q9P2M4 693 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 EBF1Q9UH73 591 aa21.72■■□□□ 1.07
PNKP-201ENST00000322344 SAMD4AQ9UPU9 718 aaKnown RBP21.72■■□□□ 1.07
PNKP-201ENST00000322344 SGTAO43765 313 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 PRAMEF4O60810 478 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 CCNDBP1O95273 360 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 TYRP14679 529 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 BIRC2Q13490 618 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 RFX4Q33E94 735 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 PRAMEF9Q5VWM5 478 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 SERPINA11Q86U17 422 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 HIPK1Q86Z02 1210 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 GAB3Q8WWW8 586 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 SCAMP4Q969E2 229 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 ETAA1Q9NY74 926 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 C3orf18Q9UK00 162 aa21.71■■□□□ 1.07
PNKP-201ENST00000322344 ANKRD33BA6NCL7 494 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 UPK3BL1B0FP48 263 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 UPK3BL2E5RIL1 263 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 GSNP06396 782 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 POLR2EP19388 210 aaKnown RBP21.7■■□□□ 1.06
PNKP-201ENST00000322344 DUOXA1Q1HG43 343 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 SLC44A4Q53GD3 710 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 SPESP1Q6UW49 350 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 KIAA0907Q7Z7F0 614 aaPredicted RBP21.7■■□□□ 1.06
PNKP-201ENST00000322344 ANKRD46Q86W74 232 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 KLHDC8AQ8IYD2 350 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 STARD8Q92502 1023 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 CLP1Q92989 425 aaKnown RBP21.7■■□□□ 1.06
PNKP-201ENST00000322344 MBOAT4Q96T53 435 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 CRISPLD2Q9H0B8 497 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 ATG10Q9H0Y0 220 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 SMURF2Q9HAU4 748 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 TDP1Q9NUW8 608 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 HCFC1R1Q9NWW0 138 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 GPRC5BQ9NZH0 403 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 MTX2O75431 263 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 PSIP1O75475 530 aaKnown RBP21.7■■□□□ 1.06
PNKP-201ENST00000322344 CSF2RAP15509 400 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 ELK4P28324 431 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 DCTP40126 519 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 NNMTP40261 264 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 CDKN2CP42773 168 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 MAPK9P45984 424 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 IST1P53990 364 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 TPD52P55327 224 aaPredicted RBP21.7■■□□□ 1.06
PNKP-201ENST00000322344 C21orf58P58505 322 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 VAC14Q08AM6 782 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 GRSF1Q12849 480 aaKnown RBP eCLIP21.7■■□□□ 1.06
PNKP-201ENST00000322344 HENMT1Q5T8I9 393 aaKnown RBP21.7■■□□□ 1.06
PNKP-201ENST00000322344 EP400NLQ6ZTU2 488 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 SYT12Q8IV01 421 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 PGBD3Q8N328 593 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 TBC1D20Q96BZ9 403 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 PCDH12Q9NPG4 1184 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 THG1LQ9NWX6 298 aaKnown RBP21.7■■□□□ 1.06
PNKP-201ENST00000322344 CDC14AQ9UNH5 594 aa21.7■■□□□ 1.06
PNKP-201ENST00000322344 SOBPA7XYQ1 873 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 E2F6O75461 281 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 TIMP1P01033 207 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 HSD3B1P14060 373 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 EEF1B2P24534 225 aaKnown RBP21.69■■□□□ 1.06
PNKP-201ENST00000322344 HSD3B2P26439 372 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 MAGEA2P43356 314 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 YAP1P46937 504 aaKnown RBP21.69■■□□□ 1.06
PNKP-201ENST00000322344 TOP3AQ13472 1001 aaPredicted RBP21.69■■□□□ 1.06
PNKP-201ENST00000322344 TEAD2Q15562 447 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms