RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CATSPEREQ5SY80 951 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 PRAMEF13Q5VWM6 474 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 CLEC6AQ6EIG7 209 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 CAPN13Q6MZZ7 669 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 FRMD7Q6ZUT3 714 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 ADCK2Q7Z695 626 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 TMPRSS11BQ86T26 416 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 ZNF781Q8N8C0 355 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 RHBDD1Q8TEB9 315 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 NEIL2Q969S2 332 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 CCDC74AQ96AQ1 378 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 L3HYPDHQ96EM0 354 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 HBEGFQ99075 208 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 DUSP23Q9BVJ7 150 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 SLC32A1Q9H598 525 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 MID1IP1Q9NPA3 183 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 HRASLS2Q9NWW9 162 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 PADI4Q9UM07 663 aa14.89□□□□□ -0.03
PDLIM5-202ENST00000318007 ASPMQ8IZT6 3477 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 ASXL3Q9C0F0 2248 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 CCDC189A1A4V9 331 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 UBXN7O94888 489 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 CHRM5P08912 532 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 EPORP19235 508 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 FASLGP48023 281 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 DNAJB13P59910 316 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 ABCE1P61221 599 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 RCN2Q14257 317 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 PCBP2Q15366 365 aaKnown RBP eCLIP14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 SF1Q15637 639 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 IRGCQ6NXR0 463 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 USP53Q70EK8 1073 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 LRRC56Q8IYG6 542 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 TCAIMQ8N3R3 496 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 SDR16C5Q8N3Y7 309 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 DNAJC11Q9NVH1 559 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 CUEDC1Q9NWM3 386 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 KCNK4Q9NYG8 393 aa14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 TNPO3Q9Y5L0 923 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-202ENST00000318007 LY6G6EA0A0G2JKS1 128 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 A0A1W2PPV9 198 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 PIPSLA2A3N6 862 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 OR7A17O14581 309 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 FFAR3O14843 346 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 YKT6O15498 198 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 GPR42O15529 346 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SH3BP5O60239 455 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 VARSP26640 1264 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SERPINB3P29508 390 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 LSP1P33241 339 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SHMT2P34897 504 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 CCNG1P51959 295 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 FOXA1P55317 472 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SH3BP2P78314 561 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 GLIPR1L2Q4G1C9 344 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 TCHHL1Q5QJ38 904 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SH2D4BQ5SQS7 431 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 PERM1Q5SV97 790 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ATG16L1Q676U5 607 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 OGFOD3Q6PK18 319 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ASCL5Q7RTU5 278 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ADGRF3Q8IZF5 1079 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 LSMEM2Q8N112 164 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 OR56A3Q8NH54 315 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ZNF483Q8TF39 744 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 NCSTNQ92542 709 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 AHCYL2Q96HN2 611 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 TMEM9BQ9NQ34 198 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 FGFR1OP2Q9NVK5 253 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 U3KQA8 63 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 RIF1Q5UIP0 2472 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ASCC3Q8N3C0 2202 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 PCDHGA12O60330 932 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 PRAMEF10O60809 474 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 OR4F21O95013 312 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 CDH1P12830 882 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 PVRP15151 417 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 GLB1P16278 677 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 NPPBP16860 134 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ASPHQ12797 758 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 CDC16Q13042 620 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 NR0B2Q15466 257 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 CYP2A13Q16696 494 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SNAP47Q5SQN1 464 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 FAM92BQ6ZTR7 304 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 MTERF4Q7Z6M4 381 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 CUZD1Q86UP6 607 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 PLD3Q8IV08 490 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 LRRC34Q8IZ02 419 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 CDYL2Q8N8U2 506 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 OR2L8Q8NGY9 312 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SMPDL3AQ92484 453 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 MTFMTQ96DP5 389 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SORT1Q99523 831 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 DRC3Q9H069 523 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ACTR8Q9H981 624 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 PNPOQ9NVS9 261 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 SPATA7Q9P0W8 599 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms