RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 GSRP00390 522 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CCNA2P20248 432 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TRPC1P48995 793 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RGS1Q08116 209 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 MRPL58Q14197 206 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 SLC44A4Q53GD3 710 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TJAP1Q5JTD0 557 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 KANK2Q63ZY3 851 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 GAREM2Q75VX8 874 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 OR5K1Q8NHB7 308 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ZCCHC10Q8TBK6 192 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 FNDC11Q9BVV2 318 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 IFT80Q9P2H3 777 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PCDHGA7Q9Y5G6 932 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DDX60Q8IY21 1712 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CREG1O75629 220 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ANGPTL1O95841 491 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DBTP11182 482 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RFTN2Q52LD8 501 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 FBXO46Q6PJ61 603 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 MFSD6LQ8IWD5 586 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 FAM81AQ8TBF8 368 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ZUFSPQ96AP4 578 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CARS2Q9HA77 564 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CLEC4EQ9ULY5 219 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TPST2O60704 377 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 MPC1LP0DKB6 136 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 GANABQ14697 944 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 HEPACAMQ14CZ8 416 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 LMNTD1Q8N9Z9 388 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 LCN9Q8WX39 176 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DDX28Q9NUL7 540 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DIDO1Q9BTC0 2240 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 AP3D1O14617 1153 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 AP2A2O94973 939 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PRAMEF12O95522 483 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PDYNP01213 254 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CDK9P50750 372 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CDH12P55289 794 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ILF3Q12906 894 aaKnown RBP eCLIP6.02□□□□□ -1.452e-6■■□□□ 13.8
PRKDC-201ENST00000314191 PLEKHS1Q5SXH7 462 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DEPDC1Q5TB30 811 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 KBTBD2Q8IY47 623 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TMEM145Q8NBT3 493 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CLIP3Q96DZ5 547 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TIMP1P01033 207 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RXRGP48443 463 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 SPINT3P49223 89 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DGKEP52429 567 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PGM2L1Q6PCE3 622 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 BHLHA9Q7RTU4 235 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 C16orf62Q7Z3J2 963 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ZCCHC7Q8N3Z6 543 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CPXM2Q8N436 756 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 GIPC3Q8TF64 312 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 GTPBP3Q969Y2 492 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DPEP2Q9H4A9 486 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CLDND1Q9NY35 253 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DNMT3BQ9UBC3 853 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PDE10AQ9Y233 779 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DGKBQ9Y6T7 804 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PRLP01236 227 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 HPGDP15428 266 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ZNF8P17098 575 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DCTN2Q13561 401 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 GCNT6Q5T4J0 391 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 TEX26Q8N6G2 289 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 PIH1D2Q8WWB5 315 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RIPOR3Q96MK2 946 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RBM4BQ9BQ04 359 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RBM4Q9BWF3 364 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 REXO4Q9GZR2 422 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CWH43Q9H720 699 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 WASH3PC4AMC7 463 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RSL1D1O76021 490 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RASGRP1O95267 797 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 IFNA16P05015 189 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ARRB2P32121 409 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CPOXP36551 454 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 ITGADQ13349 1161 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 MAPK11Q15759 364 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RFX4Q33E94 735 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 LETMD1Q6P1Q0 360 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CD300LGQ6UXG3 332 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CLECL1Q8IZS7 167 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DNAJB8Q8NHS0 232 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 SHKBP1Q8TBC3 707 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 HM13Q8TCT9 377 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CEP295NLQ96MC4 621 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 C3orf14Q9HBI5 128 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 RIMKLBQ9ULI2 386 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 FADS2O95864 444 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 DAG1Q14118 895 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CCDC157Q569K6 752 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CXorf57Q6NSI4 855 aaKnown RBP6.02□□□□□ -1.45
PRKDC-201ENST00000314191 OR4K1Q8NGD4 311 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 HERVK_113Q902F9 699 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 CEP44Q9C0F1 390 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 EPB41L1Q9H4G0 881 aa6.02□□□□□ -1.45
PRKDC-201ENST00000314191 NRAPQ86VF7 1730 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms