RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 MCMBPQ9BTE3 642 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 DHCR7Q9UBM7 475 aaKnown RBP14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 RNF14Q9UBS8 474 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 CHMP2BQ9UQN3 213 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 POLHQ9Y253 713 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 COMMD10Q9Y6G5 202 aa14.01□□□□□ -0.17
PPP1CA-201ENST00000312989 FITM1A5D6W6 292 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 TARM1B6A8C7 271 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 E5RI56 91 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 E7ENX8 843 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 SUV39H1O43463 412 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 DNAJB5O75953 348 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 FKBP9O95302 570 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 SLC16A8O95907 504 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 PDGFAP04085 211 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 KLK3P07288 261 aaPredicted RBP14□□□□□ -0.17
PPP1CA-201ENST00000312989 MCM3P25205 808 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 TAP2Q03519 686 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 FRG1Q14331 258 aaKnown RBP14□□□□□ -0.17
PPP1CA-201ENST00000312989 SF1Q15637 639 aaKnown RBP14□□□□□ -0.17
PPP1CA-201ENST00000312989 FRMPD2BQ6IN97 320 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 MRPL14Q6P1L8 145 aaKnown RBP14□□□□□ -0.17
PPP1CA-201ENST00000312989 ZNF605Q86T29 641 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 MCATQ8IVS2 390 aaKnown RBP14□□□□□ -0.17
PPP1CA-201ENST00000312989 DTWD1Q8N5C7 304 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 SPATA4Q8NEY3 305 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 PROKR1Q8TCW9 393 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 ANP32BQ92688 251 aaKnown RBP14□□□□□ -0.17
PPP1CA-201ENST00000312989 INPP5DQ92835 1189 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 ABHD17AQ96GS6 310 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 KRT12Q99456 494 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 DPH2Q9BQC3 489 aaPredicted RBP14□□□□□ -0.17
PPP1CA-201ENST00000312989 NAT9Q9BTE0 207 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 GRHL1Q9NZI5 618 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 ADAMTS6Q9UKP5 1117 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 MRFAP1Q9Y605 127 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 AP1M2Q9Y6Q5 423 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 FER1L5A0AVI2 2057 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 SPTBP11277 2137 aa14□□□□□ -0.17
PPP1CA-201ENST00000312989 RELNP78509 3460 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SMAPO00193 183 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 EIF3FO00303 357 aaPredicted RBP13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SNRNP200O75643 2136 aaKnown RBP13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 C1QAP02745 245 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SFTPCP11686 197 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 ENO3P13929 434 aaPredicted RBP13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 IMPA1P29218 277 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 CARSP49589 748 aaKnown RBP13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 RPS15P62841 145 aaKnown RBP13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SNRPNP63162 240 aaKnown RBP13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 ARHGAP19Q14CB8 494 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 HIF1AQ16665 826 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 C1orf189Q5VU69 101 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 ZNF425Q6IV72 752 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 TLDC1Q6P9B6 456 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SUSD1Q6UWL2 747 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 KIAA0408Q6ZU52 694 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 COX15Q7KZN9 410 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 GPR135Q8IZ08 494 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 ARHGEF39Q8N4T4 335 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 PPFIBP2Q8ND30 876 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 GSDMBQ8TAX9 411 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 MAGEC3Q8TD91 643 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 ZUFSPQ96AP4 578 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 LRRC39Q96DD0 335 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SNF8Q96H20 258 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 FOPNLQ96NB1 174 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 OLFM1Q99784 485 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 TRIM31Q9BZY9 425 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 MLXIPLQ9NP71 852 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 IKZF3Q9UKT9 509 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SNX24Q9Y343 169 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 PSAT1Q9Y617 370 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 SPTA1P02549 2419 aa13.99□□□□□ -0.17
PPP1CA-201ENST00000312989 LOC105369274A0A096LPK9 316 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 LOC102723532A0A0G2JNH3 316 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 RAD51CO43502 376 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 HBQ1P09105 142 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 NR1D1P20393 614 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 ETF1P62495 437 aaKnown RBP13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 TTLL9Q3SXZ7 439 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 FBXO42Q6P3S6 717 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 TTC23LQ6PF05 361 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 PAQR3Q6TCH7 311 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 ZNF572Q7Z3I7 529 aaPredicted RBP13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 PAQR7Q86WK9 346 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 OR4N4Q8N0Y3 316 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 PDIK1LQ8N165 341 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 THAP4Q8WY91 577 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 SMPDL3AQ92484 453 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 MOCS1Q9NZB8 636 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 ZC3H7BQ9UGR2 993 aaKnown RBP13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 SRPK3Q9UPE1 567 aa13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 UBR5O95071 2799 aaPredicted RBP13.98□□□□□ -0.17
PPP1CA-201ENST00000312989 EFCAB8A8MWE9 144 aa13.97□□□□□ -0.17
PPP1CA-201ENST00000312989 MAP3K7O43318 606 aa13.97□□□□□ -0.17
PPP1CA-201ENST00000312989 VPS26AO75436 327 aa13.97□□□□□ -0.17
PPP1CA-201ENST00000312989 CEACAM4O75871 244 aa13.97□□□□□ -0.17
PPP1CA-201ENST00000312989 CATP04040 527 aaKnown RBP13.97□□□□□ -0.17
PPP1CA-201ENST00000312989 UMODP07911 640 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms