RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SIX3O95343 332 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 RBM34P42696 430 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 UBE2J2Q8N2K1 259 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 MTMR14Q8NCE2 650 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ZNF514Q96K75 400 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 C14orf105Q9NVL8 296 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SOHLH2Q9NX45 425 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 A0A1W2PPW3 197 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 IQCF5A8MTL0 148 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ZNF3P17036 446 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ERP29P30040 261 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 DUOXA1Q1HG43 343 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ATXN7L2Q5T6C5 722 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 SLC35G5Q96KT7 338 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ITM2CQ9NQX7 267 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 PHPT1Q9NRX4 125 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 MAP10Q9P2G4 905 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 FZD4Q9ULV1 537 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 DAPL1A0PJW8 107 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 HPRP00739 348 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 PORP16435 677 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 TREML2Q5T2D2 321 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 OR7D4Q8NG98 312 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CLEC4CQ8WTT0 213 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SLC7A6OSQ96CW6 309 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 CLIP3Q96DZ5 547 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SLC35A5Q9BS91 424 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 FAM120CQ9NX05 1096 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 PCDH7O60245 1069 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CPNE3O75131 537 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 GBX2P52951 348 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 SIRPB2Q5JXA9 342 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 OR10H5Q8NGA6 315 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 GPER1Q99527 375 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 IRF2BPLQ9H1B7 796 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 AMBNQ9NP70 447 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SNED1Q8TER0 1413 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 PPP3R1P63098 170 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ZNF234Q14588 700 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CYS1Q717R9 158 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 LINGO2Q7L985 606 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CHCHD4Q8N4Q1 142 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 C2CD4AQ8NCU7 369 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 NCSTNQ92542 709 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SLC6A15Q9H2J7 730 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 RC3H2Q9HBD1 1191 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 P2RX2Q9UBL9 471 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 EVLQ9UI08 416 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 ABCG2Q9UNQ0 655 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ATRNL1Q5VV63 1379 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CCRL2O00421 344 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 PLSCR1O15162 318 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 MPP2Q14168 576 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 TLR1Q15399 786 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SOWAHAQ2M3V2 549 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CLEC20AQ6ZU45 233 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CACUL1Q86Y37 369 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 BORCS6Q96GS4 357 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 TNKS2Q9H2K2 1166 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 DPAGT1Q9H3H5 408 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 DUXAA6NLW8 204 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 CHP2O43745 196 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 AGR2O95994 175 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 H1F0P07305 194 aaKnown RBP12.86□□□□□ -0.35
SNED1-201ENST00000310397 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 ZNF182P17025 639 aaPredicted RBP12.86□□□□□ -0.35
SNED1-201ENST00000310397 GALNT2Q10471 571 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 TREML1Q86YW5 311 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 OR8J3Q8NGG0 315 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 MIPEPQ99797 713 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 SNX10Q9Y5X0 201 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 TREHO43280 583 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 TACSTD2P09758 323 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 HSD17B2P37059 387 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 INCA1Q0VD86 236 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 OR9I1Q8NGQ6 314 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 POPDC3Q9HBV1 291 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 GTF2IRD1Q9UHL9 959 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 XPNPEP2O43895 674 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 TGFBIQ15582 683 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 FBXL20Q96IG2 436 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 PCDHGA3Q9Y5H0 932 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 NEDD8-MDP1E9PL57 170 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 NIPSNAP2O75323 286 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 GABRR2P28476 465 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 MPIP34949 423 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 RNF38Q9H0F5 515 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 EPOP01588 193 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 PRNPP04156 253 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 BTN2A1Q7KYR7 527 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 ADGRD2Q7Z7M1 963 aa12.86□□□□□ -0.35
SNED1-201ENST00000310397 CAND1Q86VP6 1230 aaKnown RBP12.86□□□□□ -0.35
SNED1-201ENST00000310397 FAM46DQ8NEK8 389 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms