RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 CCDC138Q96M89 665 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ZIM3Q96PE6 472 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 OR4K3Q96R72 315 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CTRCQ99895 268 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 DPYSL5Q9BPU6 564 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 RAB11FIP5Q9BXF6 653 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 C12orf65Q9H3J6 166 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ZNF768Q9H5H4 540 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SLC6A20Q9NP91 592 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 C1GALT1Q9NS00 363 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SIDT1Q9NXL6 827 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 PISDQ9UG56 409 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ANGPTL2Q9UKU9 493 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 NEUROG3Q9Y4Z2 214 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 HEATR5BQ9P2D3 2071 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 IQANK1A0A1B0GTG1 560 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TK2O00142 265 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 MATN2O00339 956 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 KDM1AO60341 852 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CDH16O75309 829 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 HIST1H2AGP0C0S8 130 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SBK3P0C264 359 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ANKRD34CP0C6C1 535 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 EBLN1P0CF75 366 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 HIST1H2ADP20671 130 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CSTF2P33240 577 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 AGTR2P50052 363 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 MAPK10P53779 464 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 AP1S2P56377 157 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ATP6V0D1P61421 351 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 IFFO1Q0D2I5 559 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TRA2AQ13595 282 aaKnown RBP eCLIP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 FAM83EQ2M2I3 478 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 DEFB110Q30KQ9 67 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 PTCHD3Q3KNS1 767 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TECRLQ5HYJ1 363 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 LGSNQ5TDP6 509 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 C16orf46Q6P387 395 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CDHR3Q6ZTQ4 885 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 FRA10AC1Q70Z53 315 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TMEM151AQ8N4L1 468 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 AGBL5Q8NDL9 886 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 MDM1Q8TC05 714 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 RHBDF1Q96CC6 855 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 FBXL8Q96CD0 374 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 MTBPQ96DY7 904 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 HIST1H2AHQ96KK5 128 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 FCRL4Q96PJ5 515 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CD180Q99467 661 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CMKLR1Q99788 373 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 HIST1H2AJQ99878 128 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 EGFL8Q99944 293 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 H2AFJQ9BTM1 129 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TMEM121BQ9BXQ6 578 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 STRADBQ9C0K7 418 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SYNPO2LQ9H987 977 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 NMRAL1Q9HBL8 299 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CUEDC1Q9NWM3 386 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TMEM216Q9P0N5 145 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CPSF2Q9P2I0 782 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 RNF112Q9ULX5 631 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 NOVA2Q9UNW9 492 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 A0A0J9YY10 115 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 LRRC14BA6NHZ5 514 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 HGSO14964 777 aaPredicted RBP8.75□□□□□ -1.01
PDE4D-201ENST00000309641 TNFSF15O95150 251 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 ENO2P09104 434 aaPredicted RBP8.75□□□□□ -1.01
PDE4D-201ENST00000309641 CREB1P16220 341 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 NPPBP16860 134 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 KRT15P19012 456 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 SLC26A3P40879 764 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 FOXM1Q08050 763 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 CYP4F3Q08477 520 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 RASA2Q15283 850 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 GPR19Q15760 415 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 SLC5A12Q1EHB4 618 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 THEMIS2Q5TEJ8 643 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 PRAMEF17Q5VTA0 474 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 FCRL6Q6DN72 434 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 C4orf33Q8N1A6 199 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 C19orf47Q8N9M1 422 aaKnown RBP8.75□□□□□ -1.01
PDE4D-201ENST00000309641 OR56A3Q8NH54 315 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 WDR36Q8NI36 951 aaKnown RBP8.75□□□□□ -1.01
PDE4D-201ENST00000309641 STAG3L4Q8TBR4 150 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 GATA6Q92908 595 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 OR6C1Q96RD1 312 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 TMEM79Q9BSE2 394 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 SGPP1Q9BX95 441 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 TRIM54Q9BYV2 358 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 POLR1BQ9H9Y6 1135 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 ASCL3Q9NQ33 180 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 SOHLH2Q9NX45 425 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 CD274Q9NZQ7 290 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 XPR1Q9UBH6 696 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 ACACBO00763 2458 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 ACACAQ13085 2346 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 C1QTNF9BB2RNN3 333 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 SUPT3HB4E1H0 165 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 C9orf172C9J069 976 aa8.75□□□□□ -1.01
PDE4D-201ENST00000309641 MAP2K7O14733 419 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms