RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CLRN2A0PK11 232 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ADH1BP00325 375 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 HOXB9P17482 250 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 CRATP43155 626 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GSSP48637 474 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 BST1Q10588 318 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PDSS1Q5T2R2 415 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZNF773Q6PK81 442 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 EEPD1Q7L9B9 569 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ACTL8Q9H568 366 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CNOT2Q9NZN8 540 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 NOCTQ9UK39 431 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 NDUFB9Q9Y6M9 179 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 C4BPAP04003 597 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 PWP1Q13610 501 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CWF19L1Q69YN2 538 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 ATCAYQ86WG3 371 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MCFD2Q8NI22 146 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 MAGEE2Q8TD90 523 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 UTP15Q8TED0 518 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 SLC13A3Q8WWT9 602 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SLC30A2Q9BRI3 323 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RDH14Q9HBH5 336 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SLC2A4RGQ9NR83 387 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SNED1Q8TER0 1413 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GNSP15586 552 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 POU3F3P20264 500 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 CPT2P23786 658 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 VIPR1P32241 457 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 OSTNP61366 133 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CDKL1Q00532 357 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 OR14K1Q8NGZ2 314 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TMEM143Q96AN5 459 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PYURFQ96I23 114 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SCML2Q9UQR0 700 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ALDOAP04075 364 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 NR2F1P10589 423 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PSME3P61289 254 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 USP4Q13107 963 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 DDX39BQ13838 428 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 CARTPTQ16568 116 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SLC25A24Q6NUK1 477 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RFWD3Q6PCD5 774 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TPRA1Q86W33 373 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TBCDQ9BTW9 1192 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FAM105AQ9NUU6 356 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 LYVE1Q9Y5Y7 322 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CHD5Q8TDI0 1954 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 C17orf113A0A1B0GUU1 675 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TMEM189-UBE2V1I3L0A0 370 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 HCN1O60741 890 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TFE3P19532 575 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 CXCR3P49682 368 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FAPQ12884 760 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ADGRE1Q14246 886 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TTLL10Q6ZVT0 673 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PRSS48Q7RTY5 328 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 LGI2Q8N0V4 545 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GALNT4Q8N4A0 578 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FAM86B1Q8N7N1 296 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 NAT8LQ8N9F0 302 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ARNTL2Q8WYA1 636 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TESCQ96BS2 214 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 DHRS1Q96LJ7 313 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 RIOK2Q9BVS4 552 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 DZANK1Q9NVP4 752 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SEC14L5O43304 696 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 BMP2P12643 396 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FPR1P21462 350 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 EPHX2P34913 555 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 AVPR1BP47901 424 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 NOVP48745 357 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PPIGQ13427 754 aaKnown RBP eCLIP3.93□□□□□ -1.78
USH2A-201ENST00000307340 ATP6AP1Q15904 470 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ACTBL2Q562R1 376 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FAM205BPQ63HN1 556 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZNF730Q6ZMV8 503 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SCUBE3Q8IX30 993 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 CBARPQ8N350 705 aaPredicted RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 CADM2Q8N3J6 435 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 KLHL36Q8N4N3 616 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PLD5Q8N7P1 536 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PDLIM5Q96HC4 596 aaKnown RBP3.93□□□□□ -1.78
USH2A-201ENST00000307340 ZNF570Q96NI8 536 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 DPEP2Q9H4A9 486 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SPATA2Q9UM82 520 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 GON4LQ3T8J9 2241 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 FAM159BA6NKW6 160 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 H0YGN5 161 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 AGPSO00116 658 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SSTR1P30872 391 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PPP5CP53041 499 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 LIPEQ05469 1076 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 NOMO2Q5JPE7 1267 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 KIAA1614Q5VZ46 1190 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 SLC4A5Q9BY07 1137 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 PADI2Q9Y2J8 665 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TTLL13PA6NNM8 815 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 M0R2N6 131 aa3.93□□□□□ -1.78
USH2A-201ENST00000307340 TLR5O60602 858 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms