RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SEPHS1P49903 392 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 SULT1C3Q6IMI6 304 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 CAPN13Q6MZZ7 669 aaPredicted RBP23.62■■□□□ 1.37
HOXC9-201ENST00000303450 TRIM73Q86UV7 250 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 PDPRQ8NCN5 879 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 PITPNM3Q9BZ71 974 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 MRPL46Q9H2W6 279 aaKnown RBP23.62■■□□□ 1.37
HOXC9-201ENST00000303450 WWOXQ9NZC7 414 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 AKAP7Q9P0M2 348 aaPredicted RBP23.62■■□□□ 1.37
HOXC9-201ENST00000303450 TMEM216Q9P0N5 145 aa23.62■■□□□ 1.37
HOXC9-201ENST00000303450 IGHV5-51A0A0C4DH38 117 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 A0A0J9YY10 115 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 GOLGA6L10A6NI86 522 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 AGRPO00253 132 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 HGSO14964 777 aaPredicted RBP23.61■■□□□ 1.37
HOXC9-201ENST00000303450 GLRA3O75311 464 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 MYZAPP0CAP1 466 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 CSTF2P33240 577 aaKnown RBP eCLIP23.61■■□□□ 1.37
HOXC9-201ENST00000303450 SLC18A2Q05940 514 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 MARCH9Q86YJ5 346 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 OR2A1Q8NGT9 310 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 OR56A3Q8NH54 315 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 PYCR2Q96C36 320 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 MIPEPQ99797 713 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 PCBD2Q9H0N5 130 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 ZNF768Q9H5H4 540 aaKnown RBP23.61■■□□□ 1.37
HOXC9-201ENST00000303450 SEMA5BQ9P283 1151 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 CPSF2Q9P2I0 782 aaKnown RBP23.61■■□□□ 1.37
HOXC9-201ENST00000303450 TAC3Q9UHF0 121 aa23.61■■□□□ 1.37
HOXC9-201ENST00000303450 SLC9B1P1A6NJY1 282 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 SNRNP200O75643 2136 aaKnown RBP23.6■■□□□ 1.37
HOXC9-201ENST00000303450 FKBP9O95302 570 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 ZBTB11O95625 1053 aaPredicted RBP23.6■■□□□ 1.37
HOXC9-201ENST00000303450 GFAPP14136 432 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 LSSP48449 732 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 ARL4DP49703 201 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 C16orf72Q14CZ0 275 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 ZXDCQ2QGD7 858 aaPredicted RBP23.6■■□□□ 1.37
HOXC9-201ENST00000303450 PTCHD3Q3KNS1 767 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 PRAMEF13Q5VWM6 474 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 FAM20CQ8IXL6 584 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 OR2L3Q8NG85 312 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 PGM2Q96G03 612 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 LIN37Q96GY3 246 aaPredicted RBP23.6■■□□□ 1.37
HOXC9-201ENST00000303450 SMC6Q96SB8 1091 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 CMKLR1Q99788 373 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 SGPP1Q9BX95 441 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 CNOT10Q9H9A5 744 aaKnown RBP23.6■■□□□ 1.37
HOXC9-201ENST00000303450 SENP1Q9P0U3 644 aa23.6■■□□□ 1.37
HOXC9-201ENST00000303450 TK2O00142 265 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 MAP2K7O14733 419 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 MAP3K7O43318 606 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 CCNDBP1O95273 360 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 MTHFD2P13995 350 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 PVRP15151 417 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 ST6GAL1P15907 406 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 CMPK1P30085 196 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 CRHR1P34998 444 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 C18orf21Q32NC0 220 aaPredicted RBP23.59■■□□□ 1.37
HOXC9-201ENST00000303450 C16orf46Q6P387 395 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 KMT5CQ86Y97 462 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 AGBL5Q8NDL9 886 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 KLHL6Q8WZ60 621 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 KLHL25Q9H0H3 589 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 INTS7Q9NVH2 962 aaKnown RBP23.59■■□□□ 1.37
HOXC9-201ENST00000303450 SOHLH2Q9NX45 425 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 PTBP2Q9UKA9 531 aaKnown RBP23.59■■□□□ 1.37
HOXC9-201ENST00000303450 GRID1Q9ULK0 1009 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 KIF26BQ2KJY2 2108 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 CCDC187A0A096LP49 1063 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 SMIM24O75264 130 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 IPO13O94829 963 aaKnown RBP23.59■■□□□ 1.37
HOXC9-201ENST00000303450 PFKFB4Q16877 469 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 KIAA1614Q5VZ46 1190 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 ICE2Q659A1 982 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 FBXO39Q8N4B4 442 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 TRAPPC9Q96Q05 1148 aa23.59■■□□□ 1.37
HOXC9-201ENST00000303450 IQCGQ9H095 443 aaKnown RBP23.59■■□□□ 1.37
HOXC9-201ENST00000303450 STMN4Q9H169 189 aaPredicted RBP23.59■■□□□ 1.37
HOXC9-201ENST00000303450 MRPS30Q9NP92 439 aaKnown RBP23.59■■□□□ 1.37
HOXC9-201ENST00000303450 TAPBPO15533 448 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 NELFEP18615 380 aaKnown RBP23.58■■□□□ 1.36
HOXC9-201ENST00000303450 GGT5P36269 586 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 HSPA7P48741 367 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 HSD11B2P80365 405 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 ABATP80404 500 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 PRDX1Q06830 199 aaKnown RBP23.58■■□□□ 1.36
HOXC9-201ENST00000303450 EIF3IQ13347 325 aaKnown RBP23.58■■□□□ 1.36
HOXC9-201ENST00000303450 FBXO48Q5FWF7 155 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 LCTLQ6UWM7 567 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 CDHR3Q6ZTQ4 885 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 RAB11FIP2Q7L804 512 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 BANPQ8N9N5 519 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 APOPT1Q96IL0 206 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 SLC41A2Q96JW4 573 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 TMEM79Q9BSE2 394 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 HAUS8Q9BT25 410 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 VIPAS39Q9H9C1 493 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 TMCO1Q9UM00 188 aa23.58■■□□□ 1.36
HOXC9-201ENST00000303450 SLC22A14Q9Y267 594 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms