RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ACADLP28330 430 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 YBX1P67809 324 aaKnown RBP18.84■□□□□ 0.61
HOXC4-201ENST00000303406 MAP7Q14244 749 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 DPY19L1Q2PZI1 675 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 CCSMST1Q4G0I0 132 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 SPANXN4Q5MJ08 99 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 LRIF1Q5T3J3 769 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 AGBL4Q5VU57 503 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 PNCKQ6P2M8 343 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 TRIM74Q86UV6 250 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 ADGRG5Q8IZF4 528 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 OXR1Q8N573 874 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 TNIP2Q8NFZ5 429 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 OR9A1PQ8NGU1 263 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 CANT1Q8WVQ1 401 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 REPS1Q96D71 796 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 RIPOR3Q96MK2 946 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 CCDC115Q96NT0 180 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 OR4K3Q96R72 315 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 KXD1Q9BQD3 176 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 SGPP1Q9BX95 441 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 KCNH6Q9H252 994 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 EHD1Q9H4M9 534 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 RMND5AQ9H871 391 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 FAM8A1Q9UBU6 413 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 SCOCQ9UIL1 159 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 PCDHGA11Q9Y5H2 935 aa18.84■□□□□ 0.61
HOXC4-201ENST00000303406 A6NHS1 94 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 E7EQ34 232 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 SDC1P18827 310 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 PARM1Q6UWI2 310 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 MTSS1LQ765P7 747 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 C11orf96Q7Z7L8 435 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 SPPL2CQ8IUH8 684 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 RIMKLAQ8IXN7 391 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 MARVELD2Q8N4S9 558 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 ZNF480Q8WV37 535 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 LRTOMTQ8WZ04 291 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 STARD8Q92502 1023 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 TMEM74Q96NL1 305 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 FBRSQ9HAH7 460 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 C8orf4Q9NR00 106 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 VPS29Q9UBQ0 182 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 EGFL7Q9UHF1 273 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 RUVBL1Q9Y265 456 aaKnown RBP18.83■□□□□ 0.6
HOXC4-201ENST00000303406 DLGAP4Q9Y2H0 992 aa18.83■□□□□ 0.6
HOXC4-201ENST00000303406 A0A096LPI6 279 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 TRBV5-3A0A0A0MS03 114 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 SMNDC1O75940 238 aaKnown RBP eCLIP18.82■□□□□ 0.6
HOXC4-201ENST00000303406 ZNF26P17031 533 aaPredicted RBP18.82■□□□□ 0.6
HOXC4-201ENST00000303406 MTHFRP42898 656 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 NEK2P51955 445 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 TAS2R38P59533 333 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 RUNDC3AQ59EK9 446 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 NOXRED1Q6NXP6 359 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 PACRGLQ8N7B6 248 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 TRPV3Q8NET8 790 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 SETD7Q8WTS6 366 aaKnown RBP18.82■□□□□ 0.6
HOXC4-201ENST00000303406 FGF14Q92915 247 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 POP5Q969H6 163 aaKnown RBP18.82■□□□□ 0.6
HOXC4-201ENST00000303406 FAM131CQ96AQ9 280 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 MED8Q96G25 268 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 APIPQ96GX9 242 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 PPM1MQ96MI6 270 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 OR52A5Q9H2C5 316 aa18.82■□□□□ 0.6
HOXC4-201ENST00000303406 KRT87PA6NCN2 255 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 MID1O15344 667 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 PRPS1L1P21108 318 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 S100A3P33764 101 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 CDK3Q00526 305 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 FOLH1Q04609 750 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 MTAPQ13126 283 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 TBCELQ5QJ74 424 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 ZNF776Q68DI1 518 aaPredicted RBP18.81■□□□□ 0.6
HOXC4-201ENST00000303406 HMBOX1Q6NT76 420 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 TMEM154Q6P9G4 183 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 SLCO4C1Q6ZQN7 724 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 PDZD3Q86UT5 571 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 LRRTM4Q86VH4 590 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 LRRC56Q8IYG6 542 aaPredicted RBP18.81■□□□□ 0.6
HOXC4-201ENST00000303406 CHPFQ8IZ52 775 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 KRTCAP2Q8N6L1 136 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 ZNF513Q8N8E2 541 aaPredicted RBP18.81■□□□□ 0.6
HOXC4-201ENST00000303406 ST13P5Q8NFI4 369 aaPredicted RBP18.81■□□□□ 0.6
HOXC4-201ENST00000303406 OR52E4Q8NGH9 312 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 EME1Q96AY2 570 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 ITCHQ96J02 903 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 OR52E6Q96RD3 313 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 EFCAB11Q9BUY7 163 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 TEX101Q9BY14 249 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 ZDHHC5Q9C0B5 715 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 SIRT5Q9NXA8 310 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 CLEC1BQ9P126 229 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 TSC22D4Q9Y3Q8 395 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 DYRK1BQ9Y463 629 aa18.81■□□□□ 0.6
HOXC4-201ENST00000303406 RFXAPO00287 272 aa18.8■□□□□ 0.6
HOXC4-201ENST00000303406 MYO1DO94832 1006 aa18.8■□□□□ 0.6
HOXC4-201ENST00000303406 LYNP07948 512 aa18.8■□□□□ 0.6
HOXC4-201ENST00000303406 HRH2P25021 359 aa18.8■□□□□ 0.6
HOXC4-201ENST00000303406 TBPL1P62380 186 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms