RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SCAMP3O14828 347 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 MSI1O43347 362 aaKnown RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PI15O43692 258 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 AVPR1BP47901 424 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 HSPA7P48741 367 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 CXCL9Q07325 125 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF423Q2M1K9 1284 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ASTE1Q2TB18 679 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-201ENST00000302516 GPR135Q8IZ08 494 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 KXD1Q9BQD3 176 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 BRINP2Q9C0B6 783 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 ATPIF1Q9UII2 106 aa7.48□□□□□ -1.21
SF3B3-201ENST00000302516 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 DISC1C4P0D8 188 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 K7EPI3 171 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 TP73O15350 636 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 HOXD8P13378 290 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CLCN7P51798 805 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 HSPB3Q12988 150 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 NOL9Q5SY16 702 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 GALNTL5Q7Z4T8 443 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SLC22A16Q86VW1 577 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 RBM12BQ8IXT5 1001 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF471Q9BX82 626 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 DERL2Q9GZP9 239 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 EXO5Q9H790 373 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 LRRN3E7EW58 273 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 NEDD8-MDP1E9PL57 170 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 NFATC1O95644 943 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 NRIP1P48552 1158 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SLC9A3P48764 834 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CDKL1Q00532 357 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 GK3PQ14409 553 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SIDT2Q8NBJ9 832 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CLIP3Q96DZ5 547 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 S100A16Q96FQ6 103 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 EPYCQ99645 322 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SEZ6LQ9BYH1 1024 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 LRRN3Q9H3W5 708 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 IMP3Q9NV31 184 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 COMMD3Q9UBI1 195 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 N4BP2Q86UW6 1770 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 OR1I1O60431 355 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 IL7RP16871 459 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 MTPNP58546 118 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 MXD1Q05195 221 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 LRRN1Q6UXK5 716 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 GET4Q7L5D6 327 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 TMCO2Q7Z6W1 182 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ANKRD23Q86SG2 305 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 GALNT12Q8IXK2 581 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 HMCESQ96FZ2 354 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 PYURFQ96I23 114 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ZSCAN5AQ9BUG6 496 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 EFCAB11Q9BUY7 163 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 EBPLQ9BY08 206 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 IRF2BPLQ9H1B7 796 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SCP2D1Q9UJQ7 156 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 PPM1HQ9ULR3 514 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF701M0R085 212 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 DEFA5Q01523 94 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 RHDQ02161 417 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CRB2Q5IJ48 1285 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 LGI4Q8N135 537 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM199Q8N511 208 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 FAM46DQ8NEK8 389 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 TCEAL4Q96EI5 215 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SIPA1Q96FS4 1042 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF350Q9GZX5 532 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 HSPE1-MOB4S4R3N1 261 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 C4AP0C0L4 1744 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 C4BP0C0L5 1744 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 MED1Q15648 1581 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 FFAR2O15552 330 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 COQ9O75208 318 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 FAM163BP0C2L3 166 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 OR3A3P47888 321 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 OR3A2P47893 321 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 AP2S1P53680 142 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 FGL1Q08830 312 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 POU4F2Q12837 409 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 UBAP2Q5T6F2 1119 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 MBLAC2Q68D91 279 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ZDHHC24Q6UX98 284 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 OR8J3Q8NGG0 315 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 RBM18Q96H35 190 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 FUBP3Q96I24 572 aaKnown RBP eCLIP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 FAM83DQ9H4H8 585 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 RGS17Q9UGC6 210 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 FBXL21Q9UKT6 434 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 KIF13BQ9NQT8 1826 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 OR6C70A6NIJ9 312 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 L7N2F9 121 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 M0R233 179 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 APODP05090 189 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ITPKBP27987 946 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 NCBP2P52298 156 aaKnown RBP eCLIP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 VAMP2P63027 116 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 DSC2Q02487 901 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms