RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 RHEBL1Q8TAI7 183 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 LRRC8CQ8TDW0 803 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 KCTD4Q8WVF5 259 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 STARD8Q92502 1023 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 CCDC126Q96EE4 140 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 AHCYL2Q96HN2 611 aaKnown RBP20.44■□□□□ 0.86
SMCO4-201ENST00000298966 ZNF514Q96K75 400 aaPredicted RBP20.44■□□□□ 0.86
SMCO4-201ENST00000298966 GPR21Q99679 349 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 DERL2Q9GZP9 239 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 MRPL46Q9H2W6 279 aaKnown RBP20.44■□□□□ 0.86
SMCO4-201ENST00000298966 C12orf65Q9H3J6 166 aaKnown RBP20.44■□□□□ 0.86
SMCO4-201ENST00000298966 EMCNQ9ULC0 261 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 TP53TG5Q9Y2B4 290 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 MED16Q9Y2X0 877 aa20.44■□□□□ 0.86
SMCO4-201ENST00000298966 FADS2P1A8MWK0 482 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 TCP11X1B4DZS4 312 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 GPR89AB7ZAQ6 455 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 NDUFAB1O14561 156 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 FTH1P02794 183 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 CEACAM5P06731 702 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 BPGMP07738 259 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 VIMP08670 466 aaKnown RBP20.43■□□□□ 0.86
SMCO4-201ENST00000298966 GPR89BP0CG08 455 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 CCDC166P0CW27 439 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 CBSLP0DN79 551 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 CBSP35520 551 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 IL2P60568 153 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 IRF9Q00978 393 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 CTBSQ01459 385 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 RAET1GQ6H3X3 334 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 C16orf46Q6P387 395 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 HEATR4Q86WZ0 1026 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 LRRC34Q8IZ02 419 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 PLD6Q8N2A8 252 aaKnown RBP20.43■□□□□ 0.86
SMCO4-201ENST00000298966 BMPERQ8N8U9 685 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 ZPBPQ9BS86 351 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 SPRY4Q9C004 299 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 TRIT1Q9H3H1 467 aaKnown RBP20.43■□□□□ 0.86
SMCO4-201ENST00000298966 TFB2MQ9H5Q4 396 aaKnown RBP20.43■□□□□ 0.86
SMCO4-201ENST00000298966 IGSF5Q9NSI5 407 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 COPG2Q9UBF2 871 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 TMCO1Q9UM00 188 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 SUFUQ9UMX1 484 aa20.43■□□□□ 0.86
SMCO4-201ENST00000298966 ENO4A6NNW6 628 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 GPR39O43194 453 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 VEGFDO43915 354 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 NIPSNAP2O75323 286 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 AGFG2O95081 481 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 SLC25A14O95258 325 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-201ENST00000298966 NEFHP12036 1026 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 ENO3P13929 434 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CPA3P15088 417 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CLCN7P51798 805 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 MLLT10P55197 1068 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 TIAL1Q01085 375 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMCO4-201ENST00000298966 MC2RQ01718 297 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CSHL1Q14406 222 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CRTC2Q53ET0 693 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-201ENST00000298966 ATG16L1Q676U5 607 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CPLX4Q7Z7G2 160 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CD200R1Q8TD46 325 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 ZNF473Q8WTR7 871 aaKnown RBP20.42■□□□□ 0.86
SMCO4-201ENST00000298966 ZNF75CPQ92670 426 aaPredicted RBP20.42■□□□□ 0.86
SMCO4-201ENST00000298966 NXNL1Q96CM4 212 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 SCYL1Q96KG9 808 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 GPR78Q96P69 363 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CTRCQ99895 268 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 TEX101Q9BY14 249 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 TMPRSS11EQ9UL52 423 aa20.42■□□□□ 0.86
SMCO4-201ENST00000298966 CACNA1DQ01668 2161 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 A8MU76 341 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 MKRN2OSH3BPM6 223 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 FUCA1P04066 466 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 GRK2P25098 689 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 ACTR1BP42025 376 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 ACTR1AP61163 376 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 GTF2H3Q13889 308 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 ZNF460Q14592 562 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 SNAP47Q5SQN1 464 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 PAQR3Q6TCH7 311 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 TIPARPQ7Z3E1 657 aaKnown RBP20.41■□□□□ 0.86
SMCO4-201ENST00000298966 NUDCD3Q8IVD9 361 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 OR10G6Q8NH81 332 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 TRIM39Q9HCM9 518 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 PDP2Q9P2J9 529 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 CENPEQ02224 2701 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 ITPR2Q14571 2701 aa20.41■□□□□ 0.86
SMCO4-201ENST00000298966 KLHL33A6NCF5 533 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 VPS4BO75351 444 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 STK17BO94768 372 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 SNUPNO95149 360 aaKnown RBP20.4■□□□□ 0.86
SMCO4-201ENST00000298966 SOD1P00441 154 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 MYL2P10916 166 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 CD1DP15813 335 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 NAA20P61599 178 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 TMEM115Q12893 351 aaPredicted RBP20.4■□□□□ 0.86
SMCO4-201ENST00000298966 BCL7AQ4VC05 210 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 TECRLQ5HYJ1 363 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 ATP1A1-AS1Q5TC04 95 aa20.4■□□□□ 0.86
SMCO4-201ENST00000298966 FHL5Q5TD97 284 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms