RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SERPINB9P50453 376 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 RAB10P61026 200 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 CCL7P80098 99 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 HHEXQ03014 270 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 PRKG2Q13237 762 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 RASA2Q15283 850 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TMED2Q15363 201 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TSNQ15631 228 aaKnown RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 TRIP6Q15654 476 aaKnown RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 PPP1R3AQ16821 1122 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TSNAXIP1Q2TAA8 658 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 EXOSC6Q5RKV6 272 aaKnown RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 NKAIN2Q5VXU1 208 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 UNC5DQ6UXZ4 953 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 ZNF574Q6ZN55 896 aaPredicted RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 TIFABQ6ZNK6 161 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 ACAD11Q709F0 780 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 MARCH9Q86YJ5 346 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 LRRC56Q8IYG6 542 aaPredicted RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 ADGRF3Q8IZF5 1079 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TMEM151AQ8N4L1 468 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 Q8N9G6 341 aaPredicted RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 LINC01555Q8NAE3 123 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 OR52E1Q8NGJ3 308 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 OR5K2Q8NHB8 316 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 CFAP61Q8NHU2 1237 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 FLVCR1-AS1Q8TAF5 88 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 GABPB2Q8TAK5 448 aaPredicted RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 MAPK15Q8TD08 544 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 KCTD4Q8WVF5 259 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 WFDC12Q8WWY7 111 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 RSC1A1Q92681 617 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 NXNL1Q96CM4 212 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 CXorf40BQ96DE9 158 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 PDLIM5Q96HC4 596 aaKnown RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 PPM1MQ96MI6 270 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 CCDC3Q9BQI4 270 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TMEM109Q9BVC6 243 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TSSK1BQ9BXA7 367 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 DERL2Q9GZP9 239 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 XKR8Q9H6D3 395 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 CCDC86Q9H6F5 360 aaKnown RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 AKTIPQ9H8T0 292 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 UCK1Q9HA47 277 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 POPDC3Q9HBV1 291 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 POT1Q9NUX5 634 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 IMP3Q9NV31 184 aaKnown RBP5.72□□□□□ -1.49
SSX3-201ENST00000298396 ZNF446Q9NWS9 450 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TMEM9Q9P0T7 183 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 LRIT1Q9P2V4 623 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 TBK1Q9UHD2 729 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 PDE10AQ9Y233 779 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 CROCCQ5TZA2 2017 aa5.72□□□□□ -1.49
SSX3-201ENST00000298396 CELSR3Q9NYQ7 3312 aa5.71□□□□□ -1.49
SSX3-201ENST00000298396 TPRP12270 2363 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 A0A096LPK6 155 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 A0A1W2PNU3 283 aaPredicted RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 A0A1W2PPV9 198 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 F8W8V4 182 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 GOLGA8RI6L899 631 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 BTN3A1O00481 513 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 RASGRF2O14827 1237 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 PRICKLE3O43900 615 aaPredicted RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 OPA1O60313 960 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 VIPP01282 170 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 SNRPAP09012 282 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 CBSLP0DN79 551 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 CEACAM1P13688 526 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 ENO3P13929 434 aaPredicted RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 SLC2A4P14672 509 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 PNLIPP16233 465 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 GLB1P16278 677 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 TYRP1P17643 537 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 PSMB5P28074 263 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 IMPA1P29218 277 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 CBSP35520 551 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 CCNFP41002 786 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 SKIV2L2P42285 1042 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 HALP42357 657 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 SERPINB8P50452 374 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 NOVA1P51513 510 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 GFERP55789 205 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 IL2P60568 153 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 YBX1P67809 324 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 PLOD1Q02809 727 aaPredicted RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 PWP1Q13610 501 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 FASTKQ14296 549 aaKnown RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 CSHL1Q14406 222 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 C18orf21Q32NC0 220 aaPredicted RBP5.71□□□□□ -1.5
SSX3-201ENST00000298396 INAVAQ3KP66 663 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 TNFAIP8L3Q5GJ75 292 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 CDCP2Q5VXM1 449 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 FAM219BQ5XKK7 198 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 UGT3A1Q6NUS8 523 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 CDHR3Q6ZTQ4 885 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 B3GNT8Q7Z7M8 397 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 ISCA2Q86U28 154 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 SLC9B2Q86UD5 537 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 TRABD2AQ86V40 505 aa5.71□□□□□ -1.5
SSX3-201ENST00000298396 DCUN1D3Q8IWE4 304 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms