RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 SYN3O14994 580 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 KDELR3O43731 214 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 HS6ST1O60243 411 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 TRIM16O95361 564 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 MLYCDO95822 493 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 CR2P20023 1033 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 IL5RAQ01344 420 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 EMX2Q04743 252 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 RING1Q06587 406 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 MRPL58Q14197 206 aaKnown RBP15.2■□□□□ 0.02
UBAP1-201ENST00000297661 PTGR1Q14914 329 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 ABRAXAS2Q15018 415 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 SYT6Q5T7P8 510 aaPredicted RBP15.2■□□□□ 0.02
UBAP1-201ENST00000297661 FAM151BQ6UXP7 276 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 OR4F6Q8NGB9 312 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 SH3GL1Q99961 368 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 HTATIP2Q9BUP3 242 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 APOL5Q9BWW9 433 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 C6orf62Q9GZU0 229 aaPredicted RBP15.2■□□□□ 0.02
UBAP1-201ENST00000297661 ACTL8Q9H568 366 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 NSUN3Q9H649 340 aaKnown RBP15.2■□□□□ 0.02
UBAP1-201ENST00000297661 CCDC177Q9NQR7 707 aaPredicted RBP15.2■□□□□ 0.02
UBAP1-201ENST00000297661 FARSBQ9NSD9 589 aaKnown RBP15.2■□□□□ 0.02
UBAP1-201ENST00000297661 OPTCQ9UBM4 332 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 DNMT3LQ9UJW3 386 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 UTS2RQ9UKP6 389 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 FCF1Q9Y324 198 aaKnown RBP15.2■□□□□ 0.02
UBAP1-201ENST00000297661 BOLA1Q9Y3E2 137 aa15.2■□□□□ 0.02
UBAP1-201ENST00000297661 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 TYW5A2RUC4 315 aaKnown RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 TMEM189-UBE2V1I3L0A0 370 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 PRMT5O14744 637 aaPredicted RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 COCHO43405 550 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 VPS4BO75351 444 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 FMO3P31513 532 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 GKP32189 559 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 MASP1P48740 699 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 HSPA7P48741 367 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 GPR17Q13304 367 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ZNF177Q13360 481 aaPredicted RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ZNF404Q494X3 552 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 SNAP47Q5SQN1 464 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ALG1LQ6GMV1 187 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ZCCHC8Q6NZY4 707 aaKnown RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 OTOP2Q7RTS6 562 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 BEND7Q8N7W2 519 aaPredicted RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 HCAR2Q8TDS4 363 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 FRS2Q8WU20 508 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 TSPEARQ8WU66 669 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 BCL7CQ8WUZ0 217 aaPredicted RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ITCHQ96J02 903 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 RBM4BQ9BQ04 359 aaKnown RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 RBM4Q9BWF3 364 aaKnown RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 TM6SF2Q9BZW4 377 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 CARS2Q9HA77 564 aaKnown RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ANKHQ9HCJ1 492 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ANKRD36A6QL64 1941 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 LOC105371267A0A1B0GV96 52 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 PABPN1LA6NDY0 278 aaKnown RBP15.19■□□□□ 0.02
UBAP1-201ENST00000297661 PDZK1P1A8MUH7 402 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 K7ERQ8 282 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 STX16O14662 325 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 INPPL1O15357 1258 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 CST1P01037 141 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ANXA6P08133 673 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 SELPP16109 830 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 PRKACGP22612 351 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 SLC11A2P49281 568 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ARF5P84085 180 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 CDK10Q15131 360 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 C1orf53Q5VUE5 145 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 FUT10Q6P4F1 479 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 TUBA3EQ6PEY2 450 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 GOLGA7Q7Z5G4 137 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 SYTL1Q8IYJ3 562 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ANKK1Q8NFD2 765 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 LKAAEAR1Q8TD35 194 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 DEPDC7Q96QD5 511 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 BRINP2Q9C0B6 783 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ABCG8Q9H221 673 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 DCSTAMPQ9H295 470 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 MMP27Q9H306 513 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 ADPRHL2Q9NX46 363 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 DNAJB9Q9UBS3 223 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 AASSQ9UDR5 926 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 C3orf18Q9UK00 162 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 INVSQ9Y283 1065 aa15.19■□□□□ 0.02
UBAP1-201ENST00000297661 MYO9BQ13459 2157 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 GNGT2O14610 69 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 DFNA5O60443 496 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 ICMTO60725 284 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 FADS2O95864 444 aaKnown RBP15.18■□□□□ 0.02
UBAP1-201ENST00000297661 F11P03951 625 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 ALOX12P18054 663 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 TTPAP49638 278 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 CDH4P55283 916 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 HMGCS1Q01581 520 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 PRKG2Q13237 762 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 FAM26DQ5JW98 314 aa15.18■□□□□ 0.02
UBAP1-201ENST00000297661 CYP20A1Q6UW02 462 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms