RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 WIF1Q9Y5W5 379 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 V9GYS6 101 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 A0A0J9YYE9 177 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR6C65A6NJZ3 312 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 C12orf71A8MTZ7 269 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CIDEAO60543 219 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 HSD3B2P26439 372 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RAB7AP51149 207 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 LUMP51884 338 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 LAPTM5Q13571 262 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DAG1Q14118 895 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ADIPOR2Q86V24 386 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 WRAP53Q9BUR4 548 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 EIF5A2Q9GZV4 153 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SEMA6AQ9H2E6 1030 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ANKMY1Q9P2S6 941 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DPP7Q9UHL4 492 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MED16Q9Y2X0 877 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ADGRB2O60241 1585 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TTLL13PA6NNM8 815 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 F5H0A9 414 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FGF1P05230 155 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RAB5AP20339 215 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GLO1Q04760 184 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RBBP4Q09028 425 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SCARB2Q14108 478 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CSHL1Q14406 222 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MEF2DQ14814 521 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ABRAXAS2Q15018 415 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 EPHA10Q5JZY3 1008 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ZC3H14Q6PJT7 736 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FAM122BQ7Z309 247 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SPATA2LQ8IUW3 424 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR8S1Q8NH09 359 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CERS4Q9HA82 394 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF302Q9NR11 478 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FAM212BQ9NTI7 297 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PCDHB3Q9Y5E6 796 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 NUBP2Q9Y5Y2 271 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PTPN13Q12923 2485 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RASAL1O95294 804 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RAB3DO95716 219 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SMIM6P0DI80 62 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ERVK-10P10266 1014 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 LHCGRP22888 699 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MC3RP41968 323 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CACNB3P54284 484 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 EEFSECP57772 596 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PTPN11Q06124 597 aaPredicted RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ARHGAP1Q07960 439 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MTM1Q13496 603 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PWP1Q13610 501 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC9B1Q4ZJI4 515 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC27A3Q5K4L6 730 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 MARC1Q5VT66 337 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR2T5Q6IEZ7 315 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 KIAA1161Q6NSJ0 714 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 NCEH1Q6PIU2 408 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SMARCD3Q6STE5 483 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 OR2T29Q8NH02 315 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 AGPAT3Q9NRZ7 376 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 KCNH7Q9NS40 1196 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 NOP16Q9Y3C1 178 aaKnown RBP4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SNX10Q9Y5X0 201 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF536O15090 1300 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 ADGRB3O60242 1522 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 E9PI62 339 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 PSMD9O00233 223 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FADS1O60427 444 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 C2P06681 752 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 KCNJ1P48048 391 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SCGB2A2Q13296 93 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 GPAT2Q6NUI2 795 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 FRRS1Q6ZNA5 592 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DENND1CQ8IV53 801 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CD300LFQ8TDQ1 290 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 DEDD2Q8WXF8 326 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM209Q96SK2 561 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 NINJ2Q9NZG7 142 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 RNF150Q9ULK6 438 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 CLEC11AQ9Y240 323 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 UGT2A1Q9Y4X1 527 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 TMEM14AQ9Y6G1 99 aa4.75□□□□□ -1.65
CSMD3-201ENST00000297405 SLC12A8A0AV02 714 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 SIGLEC16A6NMB1 481 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 TPP1O14773 563 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 NFYBP25208 207 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ECI1P42126 302 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ARL4DP49703 201 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ERVK-24P63145 666 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 ZNF33BQ06732 778 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 LCP2Q13094 533 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 BAATQ14032 418 aaPredicted RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 KHDC1Q4VXA5 237 aaKnown RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 HS6ST3Q8IZP7 471 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 AGAP3Q96P47 875 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 MUC3BQ9H195 1237 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 PATZ1Q9HBE1 687 aaKnown RBP4.74□□□□□ -1.65
CSMD3-201ENST00000297405 WASH6PQ9NQA3 447 aa4.74□□□□□ -1.65
CSMD3-201ENST00000297405 RNF215Q9Y6U7 377 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms