RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 AP5B1Q2VPB7 878 aa23.38■■□□□ 1.33
SHISA5-201ENST00000296444 PGM2L1Q6PCE3 622 aa23.38■■□□□ 1.33
SHISA5-201ENST00000296444 AMZ2Q86W34 360 aa23.38■■□□□ 1.33
SHISA5-201ENST00000296444 ZCCHC2Q9C0B9 1178 aaKnown RBP23.38■■□□□ 1.33
SHISA5-201ENST00000296444 SDR39U1Q9NRG7 319 aaPredicted RBP23.38■■□□□ 1.33
SHISA5-201ENST00000296444 SLAMF8Q9P0V8 285 aa23.38■■□□□ 1.33
SHISA5-201ENST00000296444 MAP10Q9P2G4 905 aa23.38■■□□□ 1.33
SHISA5-201ENST00000296444 SLCO1B1Q9Y6L6 691 aa23.38■■□□□ 1.33
SHISA5-201ENST00000296444 ASPDHA6ND91 283 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 CHEK2O96017 543 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 EBLN1P0CF75 366 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 CHN2P52757 468 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 REP15Q6BDI9 236 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 ALDH16A1Q8IZ83 802 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 KYQ8NBH2 561 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 ACPTQ9BZG2 426 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 GALNT8Q9NY28 637 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 HALP42357 657 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 AP1S2P56377 157 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 LRP8Q14114 963 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 PTGR1Q14914 329 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 HIPK4Q8NE63 616 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 DNAJC11Q9NVH1 559 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 AIG1Q9NVV5 245 aa23.37■■□□□ 1.33
SHISA5-201ENST00000296444 ULK1O75385 1050 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 HNMTP50135 292 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 MRPS21P82921 87 aaKnown RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 CEACAM7Q14002 265 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 AGERQ15109 404 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 SMAD2Q15796 467 aaKnown RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 CATSPEREQ5SY80 951 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 LRRTM4Q86VH4 590 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 ASF1AQ9Y294 204 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 CATP04040 527 aaKnown RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 SNRPB2P08579 225 aaKnown RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 ETS2P15036 469 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 TCN1P20061 433 aaPredicted RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 MEF2AQ02078 507 aaPredicted RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 IL23RQ5VWK5 629 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 TRIM73Q86UV7 250 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 FAM160A2Q8N612 972 aaPredicted RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 CLHC1Q8NHS4 586 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 PROKR1Q8TCW9 393 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 DNASE1L2Q92874 299 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 NEIL2Q969S2 332 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 FGF22Q9HCT0 170 aa23.36■■□□□ 1.33
SHISA5-201ENST00000296444 TDRKHQ9Y2W6 561 aaKnown RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 POLR3HQ9Y535 204 aaPredicted RBP23.36■■□□□ 1.33
SHISA5-201ENST00000296444 CASQ2O14958 399 aaPredicted RBP23.35■■□□□ 1.33
SHISA5-201ENST00000296444 SLC2A4P14672 509 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 THOP1P52888 689 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 RPL38P63173 70 aaKnown RBP23.35■■□□□ 1.33
SHISA5-201ENST00000296444 DOC2AQ14183 400 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 ATP6AP1LQ52LC2 224 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 SFT2D3Q587I9 215 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 OGFOD2Q6N063 350 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 LRRC70Q7Z2Q7 622 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 HM13Q8TCT9 377 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 RLN3Q8WXF3 142 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 CCDC138Q96M89 665 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 GUCD1Q96NT3 240 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 SPNS1Q9H2V7 528 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 OSGEPL1Q9H4B0 414 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 WDR41Q9HAD4 459 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 PREBQ9HCU5 417 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 DNAAF2Q9NVR5 837 aaKnown RBP23.35■■□□□ 1.33
SHISA5-201ENST00000296444 PCDHGA7Q9Y5G6 932 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 C17orf113A0A1B0GUU1 675 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 PXNP49023 591 aaPredicted RBP23.35■■□□□ 1.33
SHISA5-201ENST00000296444 CLCNKAP51800 687 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 PDK3Q15120 406 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 CDKL4Q5MAI5 379 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 SYTL1Q8IYJ3 562 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 MIER2Q8N344 545 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 USP7Q93009 1102 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 HLA-CQ95604 372 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 BMFQ96LC9 184 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 MTERF1Q99551 399 aaKnown RBP23.35■■□□□ 1.33
SHISA5-201ENST00000296444 APOOQ9BUR5 198 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 ACAT2Q9BWD1 397 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 MMP17Q9ULZ9 603 aa23.35■■□□□ 1.33
SHISA5-201ENST00000296444 E7ENX8 843 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 ACADMP11310 421 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 ADSLP30566 484 aaPredicted RBP23.34■■□□□ 1.33
SHISA5-201ENST00000296444 ERVK-8P63133 956 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 PLIN5Q00G26 463 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 MS4A2Q01362 244 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 HERC3Q15034 1050 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 MMEL1Q495T6 779 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 METRNLQ641Q3 311 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 PTCRAQ6ISU1 281 aaPredicted RBP23.34■■□□□ 1.33
SHISA5-201ENST00000296444 LRRC56Q8IYG6 542 aaPredicted RBP23.34■■□□□ 1.33
SHISA5-201ENST00000296444 CCL4L1Q8NHW4 92 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 TRPS1Q9UHF7 1281 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 SLC22A2O15244 555 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 EML2O95834 649 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 CHRNB1P11230 501 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 NPPBP16860 134 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 TBPL1P62380 186 aa23.34■■□□□ 1.33
SHISA5-201ENST00000296444 TAP2Q03519 686 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms