RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 PPM1DO15297 605 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 STK16O75716 305 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 SERPINE1P05121 402 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 RPS17P08708 135 aaKnown RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 HSD17B2P37059 387 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 FASLGP48023 281 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 RAB28P51157 221 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 TAP2Q03519 686 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 NAE1Q13564 534 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 ARHGAP19Q14CB8 494 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 SLC35F3Q8IY50 421 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 LRRC56Q8IYG6 542 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 C2orf73Q8N5S3 287 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 ARL10Q8N8L6 244 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 LINC01555Q8NAE3 123 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 AVL9Q8NBF6 648 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 OR56A3Q8NH54 315 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 LCN9Q8WX39 176 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 MED8Q96G25 268 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 DUSP23Q9BVJ7 150 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 C1QTNF3Q9BXJ4 246 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 MYLK2Q9H1R3 596 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 MANSC1Q9H8J5 431 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 BAIAP2L1Q9UHR4 511 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 PCTPQ9UKL6 214 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 KDM1AO60341 852 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 CCNT2O60583 730 aaKnown RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 H2AFYO75367 372 aaKnown RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 SUPT7LO94864 414 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 KRT16P08779 473 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 ALPPL2P10696 532 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 CFAP157Q5JU67 520 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 ANKS6Q68DC2 871 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 ZCCHC8Q6NZY4 707 aaKnown RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 TMEM26Q6ZUK4 368 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 FAM47EQ6ZV65 393 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 ZNF761Q86XN6 746 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 TRIM42Q8IWZ5 723 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 RBM12BQ8IXT5 1001 aaKnown RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 RAB42Q8N4Z0 105 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 EID2Q8N6I1 236 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 OR4E2Q8NGC2 313 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 RAB3IL1Q8TBN0 382 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 ZNF483Q8TF39 744 aaPredicted RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 NSUN5Q96P11 429 aaKnown RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 GSTO2Q9H4Y5 243 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 SAR1AQ9NR31 198 aa17.21■□□□□ 0.35
CCDC78-201ENST00000293889 INTS7Q9NVH2 962 aaKnown RBP17.21■□□□□ 0.35
CCDC78-201ENST00000293889 E2F3O00716 465 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 SIGLEC6O43699 453 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 TGDSO95455 350 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 ZNF883P0CG24 379 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 MYF5P13349 255 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 CD59P13987 128 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 SHMT2P34897 504 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 CCR10P46092 362 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 CCNG1P51959 295 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 LIMK1P53667 647 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 CDH13P55290 713 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 TBPL1P62380 186 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 BST1Q10588 318 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 SF3A3Q12874 501 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCDC78-201ENST00000293889 PLCL1Q15111 1095 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 METTL2BQ6P1Q9 378 aaKnown RBP17.2■□□□□ 0.34
CCDC78-201ENST00000293889 AMIGO1Q86WK6 493 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 KLHDC8AQ8IYD2 350 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 OR2L8Q8NGY9 312 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 HMGCLL1Q8TB92 370 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 LRRC37BQ96QE4 947 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 SGPP1Q9BX95 441 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 RAB11FIP5Q9BXF6 653 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 SRMSQ9H3Y6 488 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 SLC32A1Q9H598 525 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 STN1Q9H668 368 aaKnown RBP17.2■□□□□ 0.34
CCDC78-201ENST00000293889 OPTCQ9UBM4 332 aa17.2■□□□□ 0.34
CCDC78-201ENST00000293889 ZNF839A8K0R7 811 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 K7EPI3 171 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 WDR47O94967 919 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 TSPAN8P19075 237 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 GRK2P25098 689 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 ARRB2P32121 409 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 STX3Q13277 289 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 BIRC2Q13490 618 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 TSTA3Q13630 321 aaPredicted RBP17.19■□□□□ 0.34
CCDC78-201ENST00000293889 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 SUSD1Q6UWL2 747 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 ATG14Q6ZNE5 492 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 FRMD7Q6ZUT3 714 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 LRRC70Q7Z2Q7 622 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 GOLGA7Q7Z5G4 137 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 THOC6Q86W42 341 aaKnown RBP17.19■□□□□ 0.34
CCDC78-201ENST00000293889 TEX9Q8N6V9 391 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 NETO1Q8TDF5 533 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 PPP4R1Q8TF05 950 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 CNDP1Q96KN2 507 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 APOLD1Q96LR9 279 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 ANKRD27Q96NW4 1050 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 DRC3Q9H069 523 aa17.19■□□□□ 0.34
CCDC78-201ENST00000293889 ZNF395Q9H8N7 513 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms