RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 IL12BP29460 328 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 DMPKQ09013 629 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 TARDBPQ13148 414 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 OR2T5Q6IEZ7 315 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 ADNP2Q6IQ32 1131 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 PAMR1Q6UXH9 720 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 OR2T29Q8NH02 315 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 CANT1Q8WVQ1 401 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 OTUB2Q96DC9 234 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 C11orf24Q96F05 449 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 CEP295NLQ96MC4 621 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF221Q9UK13 617 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 PTBP2Q9UKA9 531 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 NOBOXO60393 691 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 FSHRP23945 695 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 GSK3BP49841 420 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 RPP38P78345 283 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 FBXO43Q4G163 708 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 PLEKHS1Q5SXH7 462 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 C22orf39Q6P5X5 142 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 C6orf89Q6UWU4 347 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 CAND1Q86VP6 1230 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 RNF31Q96EP0 1072 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 PTPN18Q99952 460 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 TPK1Q9H3S4 243 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 MKKSQ9NPJ1 570 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 PAK6Q9NQU5 681 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 BTN3A3O00478 584 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 SLC31A1O15431 190 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 IFNA6P05013 189 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ALPPL2P10696 532 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 MTHFD1P11586 935 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ALAS2P22557 587 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 YAP1P46937 504 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 SEC13P55735 322 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 IRF5Q13568 498 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 CAMKVQ8NCB2 501 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 HAVCR1Q96D42 359 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 NARS2Q96I59 477 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 MAPKAP1Q9BPZ7 522 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 C16orf70Q9BSU1 422 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 NEUROD4Q9HD90 331 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ZCCHC3Q9NUD5 404 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 FAM53CQ9NYF3 392 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 INSL5Q9Y5Q6 135 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 CDC7O00311 574 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 GALK1P51570 392 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 PITPNAQ00169 270 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 HMGCS1Q01581 520 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 GHRHRQ02643 423 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 UPP1Q16831 310 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ZBED5Q49AG3 693 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ERMP1Q7Z2K6 904 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ADGRG6Q86SQ4 1221 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 C7orf61Q8IZ16 206 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 UMODL1-AS1Q8N2C9 162 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 HPS1Q92902 700 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 PPP1R14BQ96C90 147 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 B3GALT6Q96L58 329 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF641Q96N77 438 aaPredicted RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 PSKH2Q96QS6 385 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 FEM1AQ9BSK4 669 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 CD244Q9BZW8 370 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ANKHQ9HCJ1 492 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 TDP1Q9NUW8 608 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 CCNKO75909 580 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 CLDN7O95471 211 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 LEPRP48357 1165 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 STARP49675 285 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 GSCP56915 257 aaPredicted RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 GPM6BQ13491 265 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ERI1Q8IV48 349 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 TEPSINQ96N21 525 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 IL12RB2Q99665 862 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 TVP23BQ9NYZ1 205 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 CDC14AQ9UNH5 594 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 PCDH1Q08174 1060 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 FRRS1Q6ZNA5 592 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 CACNG4Q9UBN1 327 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 SLC16A5O15375 505 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 DNASE1L1P49184 302 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 RORCP51449 518 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF630Q2M218 657 aaPredicted RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 TXNDC8Q6A555 127 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 TNFAIP8L2Q6P589 184 aaPredicted RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 C1orf52Q8N6N3 182 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 ELAC1Q9H777 363 aaKnown RBP12.48□□□□□ -0.41
PTCD1-201ENST00000292478 C14orf105Q9NVL8 296 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 SLC22A14Q9Y267 594 aa12.48□□□□□ -0.41
PTCD1-201ENST00000292478 A0A1W2PQ72 361 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 DCLK1O15075 740 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 TLX3O43711 291 aaPredicted RBP12.47□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF623O75123 536 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 RFPL1O75677 317 aa12.47□□□□□ -0.41
PTCD1-201ENST00000292478 XKP51811 444 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms