RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KRT72Q14CN4 511 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 FAM83HQ6ZRV2 1179 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 LRRC70Q7Z2Q7 622 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 NRROSQ86YC3 692 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 GPSM1Q86YR5 675 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 HID1Q8IV36 788 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 DCUN1D3Q8IWE4 304 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CCDC197Q8NCU1 140 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ARMC2Q8NEN0 867 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 HMGCLL1Q8TB92 370 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 TUBGCP3Q96CW5 907 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 NAF1Q96HR8 494 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 TRMOQ9BU70 441 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 TRIT1Q9H3H1 467 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 KIR3DX1Q9H7L2 352 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 NEUROD4Q9HD90 331 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 MIEF1Q9NQG6 463 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 KLC4Q9NSK0 619 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CIDEBQ9UHD4 219 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 PRUNE2Q8WUY3 3088 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 EYSQ5T1H1 3165 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 GTF2E2P29084 291 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 HERVK_113P63132 956 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC23A3Q6PIS1 610 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 UBE2R2Q712K3 238 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 VRK3Q8IV63 474 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CFAP206Q8IYR0 622 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 TMEFF1Q8IYR6 380 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 MCOLN3Q8TDD5 553 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 PHF21BQ96EK2 531 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ERVK-6Q9BXR3 956 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 TWSG1Q9GZX9 223 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ELOVL6Q9H5J4 265 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 HAO1Q9UJM8 370 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 IKZF3Q9UKT9 509 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 KIR2DS5A0A0G2JLQ3 304 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 A0A0G2JNG1 304 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 FAM221BA6H8Z2 402 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 LRRC14BA6NHZ5 514 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 A8MT66 165 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 FAM47E-STBD1D6RA91 191 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 KIR2DS3K7RE56 304 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 C1orf105O95561 183 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 SERPINE1P05121 402 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 IMPDH1P20839 514 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CCND1P24385 295 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 HNRNPKP61978 463 aaKnown RBP eCLIP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 NFE2L1Q14494 772 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 KIR2DS5Q14953 304 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 TSNQ15631 228 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 PLA2G4EQ3MJ16 856 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 DNAJC14Q6Y2X3 702 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF483Q8TF39 744 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CNDP1Q96KN2 507 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 SIKE1Q9BRV8 207 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 THUMPD3Q9BV44 507 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 COL5A1P20908 1838 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CADP27708 2225 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CCNT2O60583 730 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 SNNO75324 88 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CPSF4O95639 269 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 XRCC1P18887 633 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ATP6V1C1P21283 382 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 SIM2Q14190 667 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 TGFBIQ15582 683 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 LAIR1Q6GTX8 287 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 PRPF18Q99633 342 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 LRRC61Q9BV99 259 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC23A2Q9UGH3 650 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 PTBP2Q9UKA9 531 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CDC7O00311 574 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 FFAR2O15552 330 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 TRIM13O60858 407 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 RPS17P08708 135 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 FGF3P11487 239 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 MTHFD1P11586 935 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 ACP5P13686 325 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 CHST15Q7LFX5 561 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 C7orf26Q96N11 449 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 WWP1Q9H0M0 922 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 TXLNGQ9NUQ3 528 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 POT1Q9NUX5 634 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 APOBEC3BQ9UH17 382 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 PDE10AQ9Y233 779 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 COLEC10Q9Y6Z7 277 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 GPR179Q6PRD1 2367 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 TK2O00142 265 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 ANXA5P08758 320 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 MTHFD2P13995 350 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 ITPKAP23677 461 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 CYP2A13Q16696 494 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 RNF165Q6ZSG1 346 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 FBXO39Q8N4B4 442 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 TSACCQ96A04 125 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 MANSC1Q9H8J5 431 aa8.18□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF358Q9NW07 568 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms