RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 DNAJC11Q9NVH1 559 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 TMEM248Q9NWD8 314 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 ACTR3BQ9P1U1 418 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 SAMD4AQ9UPU9 718 aaKnown RBP12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 MYO10Q9HD67 2058 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 MBLAC1A4D2B0 266 aaPredicted RBP12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 M0QX08 132 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 MID1O15344 667 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PRAMEF11O60813 436 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 ITGA2P17301 1181 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 INHBEP58166 350 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 VBP1P61758 197 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 DAG1Q14118 895 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PTPRRQ15256 657 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PABPC1LQ4VXU2 614 aaKnown RBP12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 RUNDC3AQ59EK9 446 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 NANOGP8Q6NSW7 305 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 FAM20CQ8IXL6 584 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 FIBCD1Q8N539 461 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 NELL1Q92832 810 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 NANOGQ9H9S0 305 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PCDHB1Q9Y5F3 818 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 MTMR11A4FU01 709 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF879B4DU55 563 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 NME4O00746 187 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PCDH8O95206 1070 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 TRBC1P01850 177 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 ELK4P28324 431 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 AP2S1P53680 142 aaPredicted RBP12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 UGT2B15P54855 530 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 RELAQ04206 551 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC13A2Q13183 592 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 MTA1Q13330 715 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 TSC22D1Q15714 1073 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 CHRNA6Q15825 494 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 TIGD6Q17RP2 521 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 C6orf136Q5SQH8 315 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 CCDC36Q8IYA8 594 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF655Q8N720 491 aaPredicted RBP12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF366Q8N895 744 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 CD99L2Q8TCZ2 262 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC38A2Q96QD8 506 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 BBS4Q96RK4 519 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 PHF24Q9UPV7 400 aa12.26□□□□□ -0.45
SLC6A1-201ENST00000287766 LOC730098B7Z3J9 87 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SELPP16109 830 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC6A2P23975 617 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SPAM1P38567 509 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC11A1P49279 550 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 RPL6Q02878 288 aaKnown RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 CYP2A13Q16696 494 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 WSCD2Q2TBF2 565 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 CXorf57Q6NSI4 855 aaKnown RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 MBOAT1Q6ZNC8 495 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 ASB18Q6ZVZ8 466 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 AMIGO1Q86WK6 493 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 UMODL1-AS1Q8N2C9 162 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF433Q8N7K0 673 aaPredicted RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 PIGKQ92643 395 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 MSANTD3Q96H12 275 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 LRCH3Q96II8 777 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 DEFB118Q96PH6 123 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 PTPN18Q99952 460 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 HEPHQ9BQS7 1158 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 LCHNA4D1U4 455 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 FPGTO14772 594 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SGTAO43765 313 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 CCNYL3P0C7X3 344 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 HPCAL1P37235 193 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 POLR2LP62875 67 aaKnown RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 PPP2R2BQ00005 443 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 ADGRF1Q5T601 910 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC25A24Q6NUK1 477 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 CERS6Q6ZMG9 384 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SH2D5Q6ZV89 423 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 TMPRSS11BQ86T26 416 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 MARVELD2Q8N4S9 558 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 RNF11Q9Y3C5 154 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 TESMINQ9Y4I5 508 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 USP3Q9Y6I4 520 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 OXSR1O95747 527 aaPredicted RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 GSTT2P0CG29 244 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 GSTT2BP0CG30 244 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 RPS14P62263 151 aaKnown RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SMARCB1Q12824 385 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 FAM91A1Q658Y4 838 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SERINC5Q86VE9 423 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 LAPTM4BQ86VI4 370 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 ZDHHC21Q8IVQ6 265 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 MUS81Q96NY9 551 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 MEAF6Q9HAF1 191 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SACM1LQ9NTJ5 587 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 PAQR5Q9NXK6 330 aaPredicted RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 RPS6KB2Q9UBS0 482 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 FUOMA2VDF0 154 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 SAP18O00422 153 aaKnown RBP12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 DFNA5O60443 496 aa12.25□□□□□ -0.45
SLC6A1-201ENST00000287766 EOMESO95936 686 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms