RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 HIST1H2AJQ99878 128 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 H2AFJQ9BTM1 129 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 FUNDC2Q9BWH2 189 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 TUBB1Q9H4B7 451 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 DEC1Q9P2X7 70 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 OPTCQ9UBM4 332 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 DKK3Q9UBP4 350 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 POLG2Q9UHN1 485 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 SARDHQ9UL12 918 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 DHRS7Q9Y394 339 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 PCDHGA3Q9Y5H0 932 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 OAS3Q9Y6K5 1087 aaKnown RBP12.55□□□□□ -0.4
ZIC3-201ENST00000287538 A0A0C4DFX4 3053 aa12.55□□□□□ -0.4
ZIC3-201ENST00000287538 ACOX3O15254 700 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 LBPP18428 481 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 ACRV1P26436 265 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 RPIAP49247 311 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 SEC13P55735 322 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 POLR2LP62875 67 aaKnown RBP12.54□□□□□ -0.4
ZIC3-201ENST00000287538 SYTL3Q4VX76 610 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 OTUD3Q5T2D3 398 aaPredicted RBP12.54□□□□□ -0.4
ZIC3-201ENST00000287538 PPP2R2DQ66LE6 453 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 XAF1Q6GPH4 301 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 UBE2R2Q712K3 238 aaPredicted RBP12.54□□□□□ -0.4
ZIC3-201ENST00000287538 PELI3Q8N2H9 469 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 CPXM2Q8N436 756 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 OR4F6Q8NGB9 312 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 HTRA1Q92743 480 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 FAR2Q96K12 515 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 TRIM15Q9C019 465 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 TBC1D14Q9P2M4 693 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 ALBP02768 609 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 EPHX1P07099 455 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 MAPK8P45983 427 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 CLCN7P51798 805 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 GTF2H2Q13888 395 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 ZNF284Q2VY69 593 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 FAM209AQ5JX71 171 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 GTF2H2CQ6P1K8 395 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 LETMD1Q6P1Q0 360 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 USP43Q70EL4 1123 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 TRAPPC5Q8IUR0 188 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 YAF2Q8IY57 180 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 RNF175Q8N4F7 328 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 FGF13Q92913 245 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 SLC25A23Q9BV35 468 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 RMND5AQ9H871 391 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 AKIP1Q9NQ31 210 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 ERVPABLB-1P60509 514 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 UFM1P61960 85 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 RPL38P63173 70 aaKnown RBP12.54□□□□□ -0.4
ZIC3-201ENST00000287538 TUBA3CQ13748 450 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 CERS6Q6ZMG9 384 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 SPRED1Q7Z699 444 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 VRK3Q8IV63 474 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 SLC22A15Q8IZD6 547 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 LILRB4Q8NHJ6 448 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 PEX13Q92968 403 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 AP2M1Q96CW1 435 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 YTHDF1Q9BYJ9 559 aaKnown RBP12.54□□□□□ -0.4
ZIC3-201ENST00000287538 DYRK4Q9NR20 520 aa12.54□□□□□ -0.4
ZIC3-201ENST00000287538 PRRT4C9JH25 899 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 NME4O00746 187 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 ZNF197O14709 1029 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 MMP20O60882 483 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 DEAF1O75398 565 aaPredicted RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 LRATO95237 230 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 LATS1O95835 1130 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 TSPAN12O95859 305 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 CYP17A1P05093 508 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 ENO2P09104 434 aaPredicted RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 HOXB8P17481 243 aaPredicted RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 EFNA1P20827 205 aaPredicted RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 DGKQP52824 942 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 PIGFQ07326 219 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 CYP51A1Q16850 503 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 TTLL9Q3SXZ7 439 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 GTF2IRD2BQ6EKJ0 949 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 GTF2IRD2Q86UP8 949 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 MIER2Q8N344 545 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 ABCB7O75027 752 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 PCDH8O95206 1070 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 JUNBP17275 347 aaPredicted RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 CCR7P32248 378 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 SOX9P48436 509 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 CSRP3P50461 194 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 GOLGA7Q7Z5G4 137 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 ADAMTSL2Q86TH1 951 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 S100ZQ8WXG8 99 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 ZNF486Q96H40 463 aaPredicted RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 MAELQ96JY0 434 aaKnown RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 SLC28A3Q9HAS3 691 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 PCTPQ9UKL6 214 aa12.53□□□□□ -0.4
ZIC3-201ENST00000287538 POLR3HQ9Y535 204 aaPredicted RBP12.53□□□□□ -0.4
ZIC3-201ENST00000287538 TMEM202A6NGA9 273 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms