RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CCNYL3P0C7X3 344 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 MYBL2P10244 700 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 FGF5P12034 268 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ZNF28P17035 718 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 IMPA1P29218 277 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CRABP2P29373 138 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TYK2P29597 1187 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 GRIA3P42263 894 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 GLRBP48167 497 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 SERPINB8P50452 374 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ITGA1P56199 1179 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TMPRSS3P57727 454 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CXADRP78310 365 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CBLBQ13191 982 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CLN3Q13286 438 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 NAE1Q13564 534 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ARHGAP19Q14CB8 494 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 NAA25Q14CX7 972 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CYP2A13Q16696 494 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ZC3H12BQ5HYM0 836 aaKnown RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 PRAMEF17Q5VTA0 474 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 KIAA1614Q5VZ46 1190 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ICE2Q659A1 982 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CAPN13Q6MZZ7 669 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 PWWP2BQ6NUJ5 590 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 FIGLAQ6QHK4 219 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 AGTRAPQ6RW13 159 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TMEM207Q6UWW9 146 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 C6orf15Q6UXA7 325 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 CYHR1Q6ZMK1 362 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CCDC81Q6ZN84 652 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CYS1Q717R9 158 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TRMT10CQ7L0Y3 403 aaKnown RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 ADAMTSL2Q86TH1 951 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 NLGN4XQ8N0W4 816 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 NLGN4YQ8NFZ3 816 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 OR2L3Q8NG85 312 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 OR1L3Q8NH93 324 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ANKRD49Q8WVL7 239 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 MR1Q95460 341 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 PYCR2Q96C36 320 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ZNF501Q96CX3 271 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 SELENOSQ9BQE4 189 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CCDC77Q9BR77 488 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 DPH7Q9BTV6 452 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 MENTQ9BUN1 341 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 SLC12A9Q9BXP2 914 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ACTR5Q9H9F9 607 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 GPN2Q9H9Y4 310 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 FAM60AQ9NP50 221 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 SNX15Q9NRS6 342 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TXLNGQ9NUQ3 528 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 WWOXQ9NZC7 414 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CD274Q9NZQ7 290 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 STOX2Q9P2F5 926 aaPredicted RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 NDOR1Q9UHB4 597 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 SERTAD3Q9UJW9 196 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 IKZF3Q9UKT9 509 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 PLCL2Q9UPR0 1127 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ZFC3H1O60293 1989 aaKnown RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 KNL1Q8NG31 2342 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 CABIN1Q9Y6J0 2220 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 A0A087X1B8 175 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 A0A096LPK6 155 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 A0A1W2PPV9 198 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 TRIM49D1C9J1S8 452 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 E7ENX8 843 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ZSCAN9O15535 394 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 ZNF749O43361 778 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 NRP2O60462 931 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 KATNA1O75449 491 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 KRT37O76014 449 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 WDR47O94967 919 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 C1QAP02745 245 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 MT-ND3P03897 115 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 KLK3P07288 261 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 LTA4HP09960 611 aaKnown RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 SLC35E2BP0CK96 405 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ERGP11308 486 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 TFEBP19484 476 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 CCND1P24385 295 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 GRK3P35626 688 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 DLSTP36957 453 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 GMPRP36959 345 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 SERPINB9P50453 376 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 AP1S2P56377 157 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 VSX2P58304 361 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 ATP6V0D1P61421 351 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 YBX1P67809 324 aaKnown RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 IRF9Q00978 393 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 TAP2Q03519 686 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 TLE3Q04726 772 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 SRSF6Q13247 344 aaKnown RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 SLC29A2Q14542 456 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 ZKSCAN8Q15776 578 aaPredicted RBP6.28□□□□□ -1.4
CD44-204ENST00000279452 ZIC1Q15915 447 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 FAM83EQ2M2I3 478 aa6.28□□□□□ -1.4
CD44-204ENST00000279452 COL28A1Q2UY09 1125 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms