RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CATSPEREQ5SY80 951 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ZNF691Q5VV52 312 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 UBE2R2Q712K3 238 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 HORMAD1Q86X24 394 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 RNF168Q8IYW5 571 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 RBFAQ8N0V3 343 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 LEMD2Q8NC56 503 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 OR5K1Q8NHB7 308 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PIH1D2Q8WWB5 315 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 REXO5Q96IC2 774 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 CLMPQ9H6B4 373 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 SERHLQ9NQF3 203 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 BLOC1S6Q9UL45 172 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PAIP2BQ9ULR5 123 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 LOC100506127A0A0U1RQW1 187 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 OR2AG2A6NM03 316 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CLDN25C9JDP6 229 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 SERPINB7O75635 380 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 RECQL5O94762 991 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 HSMCR30P0CW71 290 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ACPPP15309 386 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ZNF12P17014 697 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 SDC1P18827 310 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 EPORP19235 508 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PCMT1P22061 227 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CCR7P32248 378 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 OR1E2P47887 323 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 TM4SF4P48230 202 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CCL23P55773 120 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 TP53BP2Q13625 1128 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 MRPL58Q14197 206 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 UAP1L1Q3KQV9 507 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ATP13A5Q4VNC0 1218 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ZCCHC7Q8N3Z6 543 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 TRUB1Q8WWH5 349 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 PROX1Q92786 737 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 MUL1Q969V5 352 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 MED8Q96G25 268 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 TUBA1CQ9BQE3 449 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 TMEM121BQ9BXQ6 578 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 REXO4Q9GZR2 422 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 RUBCNLQ9H714 662 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 AASDHPPTQ9NRN7 309 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 SIRT5Q9NXA8 310 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 RNF186Q9NXI6 227 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ENPP5Q9UJA9 477 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ZNF229Q9UJW7 825 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 OARD1Q9Y530 152 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CPQQ9Y646 472 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CHD7Q9P2D1 2997 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 SLC28A1O00337 649 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 SAP18O00422 153 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 PRAMEF4O60810 478 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PGLSO95336 258 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ZDHHC11BP0C7U3 371 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 BMP4P12644 408 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CD6P30203 668 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 NKX2-5P52952 324 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 CREMQ03060 361 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 MADCAM1Q13477 382 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 GBX1Q14549 363 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PRAMEF9Q5VWM5 478 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CPZQ66K79 652 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 NEK5Q6P3R8 708 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 RBM12BQ8IXT5 1001 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 STK40Q8N2I9 435 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 TMEM132CQ8N3T6 1108 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 DNAJC5GQ8N7S2 189 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 TERB1Q8NA31 727 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 TTC29Q8NA56 475 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 CHPT1Q8WUD6 406 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CASD1Q96PB1 797 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 ALPK1Q96QP1 1244 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 YTHDF1Q9BYJ9 559 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 C6orf62Q9GZU0 229 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 ZBTB20Q9HC78 741 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 TMEM9Q9P0T7 183 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 INTS6Q9UL03 887 aaKnown RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 TESMINQ9Y4I5 508 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PCDHGA10Q9Y5H3 936 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PMF1-BGLAPU3KQ54 211 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PRRG1O14668 218 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 FPGTO14772 594 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 YY2O15391 372 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 SCELO95171 688 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 NPPAP01160 153 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 DBTP11182 482 aaKnown RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 ACRV1P26436 265 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 IDH2P48735 452 aaKnown RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 CYP4F8P98187 520 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 ABRQ12979 859 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 FXNQ16595 210 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 DEFB115Q30KQ5 88 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 GPR149Q86SP6 731 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 SYT12Q8IV01 421 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 PIK3C3Q8NEB9 887 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 SCAMP4Q969E2 229 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 SH3KBP1Q96B97 665 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 FAM210AQ96ND0 272 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 CPPED1Q9BRF8 314 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms