RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TIE1P35590 1138 aa13.99□□□□□ -0.17
CUX2-201ENST00000261726 ENPP2Q13822 863 aa13.99□□□□□ -0.17
CUX2-201ENST00000261726 GDF6Q6KF10 455 aaPredicted RBP13.99□□□□□ -0.17
CUX2-201ENST00000261726 ZNF565Q8N9K5 539 aa13.99□□□□□ -0.17
CUX2-201ENST00000261726 NUS1Q96E22 293 aa13.99□□□□□ -0.17
CUX2-201ENST00000261726 PCED1BQ96HM7 432 aa13.99□□□□□ -0.17
CUX2-201ENST00000261726 ZNF226Q9NYT6 803 aa13.99□□□□□ -0.17
CUX2-201ENST00000261726 CYTH4Q9UIA0 394 aa13.99□□□□□ -0.17
CUX2-201ENST00000261726 PNLIPRP1P54315 467 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 WSCD2Q2TBF2 565 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 AKAP1Q92667 903 aaKnown RBP eCLIP13.98□□□□□ -0.17
CUX2-201ENST00000261726 AMBNQ9NP70 447 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 A0A0G2JPF8 293 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 A0A1W2PRB8 838 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 HNRNPCL3B7ZW38 293 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 PRLP01236 227 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 HNRNPCL4P0DMR1 293 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 GNSP15586 552 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 PTX3P26022 381 aaPredicted RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 TPTEP56180 551 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 GALNT11Q8NCW6 608 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 THEM6Q8WUY1 208 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 HMGB4Q8WW32 186 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 SLC13A3Q8WWT9 602 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 TMCO6Q96DC7 493 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 C7orf26Q96N11 449 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 VNN3Q9NY84 501 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 CACNG4Q9UBN1 327 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 SLC35F4A4IF30 521 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 BHMG1C9JSJ3 638 aaPredicted RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 TGFB1I1O43294 461 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 RBM34P42696 430 aaKnown RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 NFKB2Q00653 900 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 GAD2Q05329 585 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 ROPN1LQ96C74 230 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 BARD1Q99728 777 aaKnown RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 RUVBL1Q9Y265 456 aaKnown RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 H3BNX3 289 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 ACP5P13686 325 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 AMZ2Q86W34 360 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 TM9SF2Q99805 663 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 IFT52Q9Y366 437 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 PCDHGA11Q9Y5H2 935 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 SQORQ9Y6N5 450 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 COL1A2P08123 1366 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 SRRM3A6NNA2 597 aaPredicted RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 NPIPA5E9PKD4 350 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 DSG2Q14126 1118 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 TAF1AQ15573 450 aaPredicted RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 C2orf27AQ580R0 203 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 PHC3Q8NDX5 983 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 OR5T2Q8NGG2 359 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 GPR20Q99678 358 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 KLRF1Q9NZS2 232 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 GMEB2Q9UKD1 530 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 PRDM4Q9UKN5 801 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 NPIPA1Q9UND3 350 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 BAZ2BQ9UIF8 2168 aaKnown RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 SLC38A8A6NNN8 435 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 H0YGN5 161 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 NDUFS4O43181 175 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 CLEC3AO75596 197 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 HCKP08631 526 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 DHPSP49366 369 aaPredicted RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 SLC10A7Q0GE19 358 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 FKBP1CQ5VVH2 108 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 SLC29A4Q7RTT9 530 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 PLA2G15Q8NCC3 412 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 OR10G2Q8NGC3 310 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 SLC35A5Q9BS91 424 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 CARS2Q9HA77 564 aaKnown RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 ARHGEF4Q9NR80 690 aa13.98□□□□□ -0.17
CUX2-201ENST00000261726 RPL36Q9Y3U8 105 aaKnown RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 AFDNP55196 1824 aaKnown RBP13.98□□□□□ -0.17
CUX2-201ENST00000261726 C2orf92A0A1B0GVN3 265 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 A0A1B0GVT2 93 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 DPPA5A6NC42 116 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 PRORSD1PA6NEY8 169 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 DGKEP52429 567 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 EIF5AP63241 154 aaKnown RBP13.97□□□□□ -0.17
CUX2-201ENST00000261726 CD83Q01151 205 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 CBLBQ13191 982 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 PAQR7Q86WK9 346 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 OR5K1Q8NHB7 308 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 GTPBP2Q9BX10 602 aaKnown RBP13.97□□□□□ -0.17
CUX2-201ENST00000261726 MRPS17Q9Y2R5 130 aaKnown RBP13.97□□□□□ -0.17
CUX2-201ENST00000261726 LRRC10BA6NIK2 292 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 IL33O95760 270 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 MMP8P22894 467 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 CDKN2BP42772 138 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 CCR8P51685 355 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 TMED4Q7Z7H5 227 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 ZNF227Q86WZ6 799 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 IRGQQ8WZA9 623 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 IL4I1Q96RQ9 567 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 MAGEH1Q9H213 219 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 PDZD7Q9H5P4 517 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 ZDHHC4Q9NPG8 344 aa13.97□□□□□ -0.17
CUX2-201ENST00000261726 CFAP20Q9Y6A4 193 aaKnown RBP13.97□□□□□ -0.17
CUX2-201ENST00000261726 GNAZP19086 355 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms