RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 C9P02748 559 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 SMIM18P0DKX4 95 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF28P17035 718 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 SDC1P18827 310 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 IMPDH1P20839 514 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 SCTRP47872 440 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC12A2P55011 1212 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 UFM1P61960 85 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PERM1Q5SV97 790 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 DEFB123Q8N688 67 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 CCDC63Q8NA47 563 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 OR4F6Q8NGB9 312 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 DNAJB14Q8TBM8 379 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ALG9Q9H6U8 611 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PSMC3IPQ9P2W1 217 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 UBA2Q9UBT2 640 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 MMP17Q9ULZ9 603 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 INVSQ9Y283 1065 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 SPTY2D1-AS1A0A0U1RR47 76 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ZW10O43264 779 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 LZTS3O60299 673 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 THOP1P52888 689 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 HMGCS1Q01581 520 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 MLLT1Q03111 559 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 CST6Q15828 149 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 CYP2A13Q16696 494 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 AGAP9Q5VTM2 703 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ADAMTSL4Q6UY14 1074 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 GOLGA7Q7Z5G4 137 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 TBC1D19Q8N5T2 526 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PSMA8Q8TAA3 256 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 CHTF18Q8WVB6 975 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 MAGEB18Q96M61 343 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 HTATIP2Q9BUP3 242 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 NTMT1Q9BV86 223 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PHF7Q9BWX1 381 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PCDHAC1Q9H158 963 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 CCDC86Q9H6F5 360 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 LNPEPQ9UIQ6 1025 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 IGHV5-51A0A0C4DH38 117 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 FAM47DPA6NHR8 397 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 H7C0C1 242 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 PRRG1O14668 218 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 TGDSO95455 350 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 EDNRAP25101 427 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 TIE1P35590 1138 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 GRIA3P42263 894 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ATP5OP48047 213 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEM115Q12893 351 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 SPOUT1Q5T280 376 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 YTHDF3Q7Z739 585 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 RAB42Q8N4Z0 105 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 METTL25Q8N6Q8 603 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 GPR156Q8NFN8 814 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 TBC1D10AQ9BXI6 508 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 CENPHQ9H3R5 247 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 LRRC40Q9H9A6 602 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 VCX3AQ9NNX9 186 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 ENTPD7Q9NQZ7 604 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 TRPM5Q9NZQ8 1165 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 BAIAP2L1Q9UHR4 511 aa5.41□□□□□ -1.54
TOPBP1-201ENST00000260810 MEI4A8MW99 385 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 TNFSF14O43557 240 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 GBAP04062 536 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 TSPAN19P0C672 248 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 GABRB1P18505 474 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 RECQLP46063 649 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 RENBPP51606 427 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 PCBP3P57721 371 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 CORO7P57737 925 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 HERVK_113P63132 956 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 PRAMEP78395 509 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 ELAVL3Q14576 367 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 ARL13BQ3SXY8 428 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 RABL3Q5HYI8 236 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF761Q86XN6 746 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 GLYATL1Q969I3 302 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEM125Q96AQ2 219 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 ASB2Q96Q27 587 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 VAT1Q99536 393 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 ERVK-6Q9BXR3 956 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 XAB2Q9HCS7 855 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 ASIC3Q9UHC3 531 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 STAP1Q9ULZ2 295 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 CLDN24A6NM45 220 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 STATHP02808 62 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 GP5P40197 560 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 HADHAP40939 763 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 BCL6P41182 706 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 DGKGP49619 791 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 IST1P53990 364 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 HKDC1Q2TB90 917 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 SPANXN3Q5MJ09 141 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 SYT13Q7L8C5 426 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 PLD3Q8IV08 490 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 CACNA2D3Q8IZS8 1091 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 PDZD8Q8NEN9 1154 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 LPCAT1Q8NF37 534 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 BLOC1S5Q8TDH9 187 aa5.4□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF641Q96N77 438 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms