RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OR2L3Q8NG85 312 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 PNPLA2Q96AD5 504 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 ACAT2Q9BWD1 397 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 STOX2Q9P2F5 926 aaPredicted RBP18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 DOCK10Q96BY6 2186 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 ICE1Q9Y2F5 2266 aa18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 MDC1Q14676 2089 aaKnown RBP18.21■□□□□ 0.51
TM6SF1-201ENST00000258909 A0A0J9YVX5 310 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 A0A1W2PPV9 198 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 DSCR3O14972 297 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 KRT14P02533 472 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 MYBPC3Q14896 1274 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 PLEKHN1Q494U1 663 aaPredicted RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 ACSBG2Q5FVE4 666 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 WASHC2DQ5SRD0 308 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 VWA5B1Q5TIE3 1220 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 KIAA0930Q6ICG6 404 aaPredicted RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 CENPUQ71F23 418 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 CAND1Q86VP6 1230 aaKnown RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 OR2A1Q8NGT9 310 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 ZUFSPQ96AP4 578 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 C19orf60Q96EN9 201 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 MS4A14Q96JA4 679 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 SOX17Q9H6I2 414 aaPredicted RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 ZNF552Q9H707 407 aaPredicted RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 ZBTB20Q9HC78 741 aaPredicted RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 HOMER3Q9NSC5 361 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 PPP2R2CQ9Y2T4 447 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 MAU2Q9Y6X3 613 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 NUP210LQ5VU65 1888 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 LOC105369274A0A096LPK9 316 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 LOC102723532A0A0G2JNH3 316 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 TCP11X1B4DZS4 312 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 TARM1B6A8C7 271 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 GOLGA8MH3BSY2 632 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 MED26O95402 600 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 ESR1P03372 595 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 EIF2S1P05198 315 aaKnown RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 CCNFP41002 786 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 NKG7Q16617 165 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 TCTE1Q5JU00 501 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 RNF187Q5TA31 235 aaPredicted RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 NEPROQ6NW34 567 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 SUSD1Q6UWL2 747 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 HPS6Q86YV9 775 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 OR4N4Q8N0Y3 316 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 TTC29Q8NA56 475 aaPredicted RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 HMGCLL1Q8TB92 370 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 ZNF285Q96NJ3 590 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 TCF12Q99081 682 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 C5AR2Q9P296 337 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 CTSFQ9UBX1 484 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 ZC3H7BQ9UGR2 993 aaKnown RBP18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 CDC23Q9UJX2 597 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 MRFAP1Q9Y605 127 aa18.2■□□□□ 0.5
TM6SF1-201ENST00000258909 CNTRLQ7Z7A1 2325 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 NBPF19A0A087WUL8 3843 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 ARHGEF33A8MVX0 844 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 AGPSO00116 658 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 PFDN6O15212 129 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 AGFG2O95081 481 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 MATN4O95460 622 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 PKMP14618 531 aaKnown RBP18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 SARNPP82979 210 aaKnown RBP18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 MRPL49Q13405 166 aaKnown RBP18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 TSTA3Q13630 321 aaPredicted RBP18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 GBX1Q14549 363 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 KLHL38Q2WGJ6 581 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 CILP2Q8IUL8 1156 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 MAGEC3Q8TD91 643 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 MAGOHBQ96A72 148 aaKnown RBP18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 FKBP10Q96AY3 582 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 ZNF669Q96BR6 464 aaPredicted RBP18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 PSMG3-AS1Q96PY0 264 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 SPSB2Q99619 263 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 SLC30A3Q99726 388 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 SLC6A20Q9NP91 592 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 ATP13A2Q9NQ11 1180 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 FBXL4Q9UKA2 621 aa18.19■□□□□ 0.5
TM6SF1-201ENST00000258909 HIVEP3Q5T1R4 2406 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 HEATR5BQ9P2D3 2071 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 HYKKA2RU49 373 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 E5RI56 91 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 H3BMM5 538 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 FKBP9O95302 570 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 IGHEP01854 428 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 PIM1P11309 404 aaPredicted RBP18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 GP1BBP13224 206 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 OGNP20774 298 aaKnown RBP18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 MMP11P24347 488 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 ITGA3P26006 1051 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 MAGEA6P43360 314 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 DHX34Q14147 1143 aaKnown RBP18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 EIF2S3LQ2VIR3 472 aaKnown RBP18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 FHL5Q5TD97 284 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 DENND6AQ8IWF6 608 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 OR9A1PQ8NGU1 263 aa18.18■□□□□ 0.5
TM6SF1-201ENST00000258909 MESP1Q9BRJ9 268 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms