RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 VPS35Q96QK1 796 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ZNF347Q96SE7 839 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TCF25Q9BQ70 676 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TUBA1CQ9BQE3 449 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SGK2Q9HBY8 427 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 PALMDQ9NP74 551 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TBCCD1Q9NVR7 557 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 WDR70Q9NW82 654 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 THUMPD1Q9NXG2 353 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 GIN1Q9NXP7 522 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 GPRC5BQ9NZH0 403 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 CFAP97Q9P2B7 532 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 AP3M1Q9Y2T2 418 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 Q9Y3F1 56 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 MAP4K5Q9Y4K4 846 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ARID2Q68CP9 1835 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ZNF701M0R085 212 aaPredicted RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 OR7A17O14581 309 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SLC22A1O15245 554 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SMAD6O43541 496 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 KRT75O95678 551 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 URODP06132 367 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 EPORP19235 508 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 NSG1P42857 185 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SNRPD1P62314 119 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 CTBSQ01459 385 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 RING1Q06587 406 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 DMPKQ09013 629 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ABHD18Q0P651 414 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 CDK5R2Q13319 367 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 MTA1Q13330 715 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TUBA3CQ13748 450 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 GANABQ14697 944 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 FRG2Q64ET8 278 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TTC23LQ6PF05 361 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 DLEU7Q6UYE1 221 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 Q6ZNX1 250 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 DCP2Q8IU60 420 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 TRAPPC5Q8IUR0 188 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 CLECL1Q8IZS7 167 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SCML4Q8N228 414 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 BEND7Q8N7W2 519 aaPredicted RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 OR4A15Q8NGL6 344 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 OR5AK3PQ8NH89 298 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 PHF10Q8WUB8 498 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 FAR1Q8WVX9 515 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 UBE2FQ969M7 185 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 PPP1R14BQ96C90 147 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 FRG2BQ96QU4 278 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 OSBPL10Q9BXB5 764 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 BRINP2Q9C0B6 783 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SLC32A1Q9H598 525 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 CCNB1IP1Q9NPC3 277 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 IL26Q9NPH9 171 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 IL17CQ9P0M4 197 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SLC13A4Q9UKG4 626 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 NEU3Q9UQ49 428 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 PRSS21Q9Y6M0 314 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 CENPFP49454 3210 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 BRWD3Q6RI45 1802 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ZNF840PA6NDX5 716 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 DRGXA6NNA5 263 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 A8MU76 341 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 KPNA3O00505 521 aaPredicted RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 DLGAP1O14490 977 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ALDH1A1P00352 501 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 LRG1P02750 347 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 KLKB1P03952 638 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 CATP04040 527 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 EBLN1P0CF75 366 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 PRPS2P11908 318 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 RRM2P31350 389 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 DNAJA1P31689 397 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 HNF1BP35680 557 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 HMGCLP35914 325 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 HPCAL1P37235 193 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 MAGEA11P43364 429 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 STK19P49842 368 aaPredicted RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 NKX2-5P52952 324 aaPredicted RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 ACLYP53396 1101 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 RPS3AP61247 264 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 AP1S1P61966 158 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 FKBP1BP68106 108 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 ADARB1P78563 741 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 CYP4F8P98187 520 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 EMX1Q04741 257 aaPredicted RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 TP53BP2Q13625 1128 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TIGD6Q17RP2 521 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 UAP1L1Q3KQV9 507 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 DEPDC1Q5TB30 811 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 LRRC66Q68CR7 880 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 NIPAL1Q6NVV3 410 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 SUSD1Q6UWL2 747 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 Q6ZPB1 254 aaPredicted RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 TAS1R1Q7RTX1 841 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 RBM23Q86U06 439 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 PTRH1Q86Y79 214 aaKnown RBP4.62□□□□□ -1.67
USP44-201ENST00000258499 UBE2J2Q8N2K1 259 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TTC30BQ8N4P2 665 aa4.62□□□□□ -1.67
USP44-201ENST00000258499 TRPV1Q8NER1 839 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms