RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 IGHV5-10-1A0A0J9YXX1 117 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 A0A0J9YY10 115 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 DCDC2BA2VCK2 349 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 SUPT3HB4E1H0 165 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 G3V2L1 256 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 TM9SF1O15321 606 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 SMIM24O75264 130 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 SUPT3HO75486 399 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 CCNDBP1O95273 360 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 S100BP04271 92 aaPredicted RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 TAC1P20366 129 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 ETV4P43268 484 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 PPP1CAP62136 330 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 PRDX1Q06830 199 aaKnown RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 PCDH1Q08174 1060 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 NAE1Q13564 534 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 NAA25Q14CX7 972 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 C16orf46Q6P387 395 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 DHRS13Q6UX07 377 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 ZYG11AQ6WRX3 759 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 USP53Q70EK8 1073 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 LRRC70Q7Z2Q7 622 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 RAB44Q7Z6P3 723 aaPredicted RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 TMPRSS12Q86WS5 348 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 KMT5CQ86Y97 462 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 FBXO39Q8N4B4 442 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 DCBLD1Q8N8Z6 715 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 PPFIBP2Q8ND30 876 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 OR2L3Q8NG85 312 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 KLHL6Q8WZ60 621 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 ARL8AQ96BM9 186 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 TMEM74Q96NL1 305 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 MIPEPQ99797 713 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 CD244Q9BZW8 370 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 IQCGQ9H095 443 aaKnown RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 TMEM9Q9P0T7 183 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 CPSF2Q9P2I0 782 aaKnown RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 ANKMY1Q9P2S6 941 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 MID2Q9UJV3 735 aa13.61□□□□□ -0.23
VPS25-201ENST00000253794 ATXN7L1Q9ULK2 861 aaPredicted RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 TNPO3Q9Y5L0 923 aaKnown RBP13.61□□□□□ -0.23
VPS25-201ENST00000253794 GSAPA4D1B5 854 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 NCF1BA6NI72 391 aaPredicted RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 A8MT66 165 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 NCF1CA8MVU1 366 aaPredicted RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 ISM1B1AKI9 464 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 HGSO14964 777 aaPredicted RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 STK16O75716 305 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 MT-CO3P00414 261 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 MSL3P1P0C860 447 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 GFAPP14136 432 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 NCF1P14598 390 aaPredicted RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 NPPBP16860 134 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 ATP5F1P24539 256 aaPredicted RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 HRH2P25021 359 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 RPA3P35244 121 aaPredicted RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 LSSP48449 732 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 MAGOHP61326 146 aaKnown RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 RELAQ04206 551 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 E2F2Q14209 437 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 PFKFB4Q16877 469 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 TTMPQ5BVD1 217 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 PRAMEF13Q5VWM6 474 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 ICE2Q659A1 982 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 IRGCQ6NXR0 463 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 SUSD1Q6UWL2 747 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 THOC6Q86W42 341 aaKnown RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 SLC22A9Q8IVM8 553 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 TCP10LQ8TDR4 215 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 CCDC126Q96EE4 140 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 SLC41A2Q96JW4 573 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 TGM7Q96PF1 710 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 OR4K3Q96R72 315 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 HAUS8Q9BT25 410 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 ATG10Q9H0Y0 220 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 SEMA6CQ9H3T2 930 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 ZNF768Q9H5H4 540 aaKnown RBP13.6□□□□□ -0.23
VPS25-201ENST00000253794 WWOXQ9NZC7 414 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 GPRC5BQ9NZH0 403 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 BTRCQ9Y297 605 aa13.6□□□□□ -0.23
VPS25-201ENST00000253794 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 HMGB1P1B2RPK0 211 aaPredicted RBP13.59□□□□□ -0.23
VPS25-201ENST00000253794 K7EPI3 171 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 DLX3O60479 287 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 SPAG7O75391 227 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 ZWINTO95229 277 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 RPS17P08708 135 aaKnown RBP13.59□□□□□ -0.23
VPS25-201ENST00000253794 DHRS4L1P0CG22 281 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 PSMB5P28074 263 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 CMPK1P30085 196 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 PRKAA2P54646 552 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 INHBCP55103 352 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 DNAJB13P59910 316 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 NAA20P61599 178 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 ISXQ2M1V0 245 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 HES3Q5TGS1 186 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 TMPRSS7Q7RTY8 843 aa13.59□□□□□ -0.23
VPS25-201ENST00000253794 TAX1BP1Q86VP1 789 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms