RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PRR23BQ6ZRT6 265 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 MILR1Q7Z6M3 343 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 AMIGO1Q86WK6 493 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 ZNF781Q8N8C0 355 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 ANKS4BQ8N8V4 417 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 GPR156Q8NFN8 814 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 SLC37A2Q8TED4 501 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 NSUN5Q96P11 429 aaKnown RBP12.52□□□□□ -0.41
LSM8-201ENST00000249299 ATG10Q9H0Y0 220 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 MID1IP1Q9NPA3 183 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 SEMA4BQ9NPR2 832 aaPredicted RBP12.52□□□□□ -0.41
LSM8-201ENST00000249299 MRGBPQ9NV56 204 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 NLGN3Q9NZ94 848 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 ZDHHC2Q9UIJ5 367 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 APOBEC2Q9Y235 224 aaKnown RBP12.52□□□□□ -0.41
LSM8-201ENST00000249299 TSC22D4Q9Y3Q8 395 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 DYRK1BQ9Y463 629 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 ASB1Q9Y576 335 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 PCDHB11Q9Y5F2 797 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 CFAP20Q9Y6A4 193 aaKnown RBP12.52□□□□□ -0.41
LSM8-201ENST00000249299 CACNA1EQ15878 2313 aa12.52□□□□□ -0.41
LSM8-201ENST00000249299 SPAG17Q6Q759 2223 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 THADAQ6YHU6 1953 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 LRP4O75096 1905 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ATXN2Q99700 1313 aaKnown RBP12.51□□□□□ -0.41
LSM8-201ENST00000249299 SERTM1A2A2V5 107 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 LRRC14BA6NHZ5 514 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 OR7A17O14581 309 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ZW10O43264 779 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 NOBOXO60393 691 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 LYPLA1O75608 230 aaPredicted RBP12.51□□□□□ -0.41
LSM8-201ENST00000249299 WFS1O76024 890 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 CFIP05156 583 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 RETP07949 1114 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 CELA2BP08218 269 aaPredicted RBP12.51□□□□□ -0.41
LSM8-201ENST00000249299 EPORP19235 508 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 CCT8P50990 548 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 EPHA4P54764 986 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 INHBCP55103 352 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 IRX1P78414 480 aaPredicted RBP12.51□□□□□ -0.41
LSM8-201ENST00000249299 HHEXQ03014 270 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 RELAQ04206 551 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 PRDX1Q06830 199 aaKnown RBP12.51□□□□□ -0.41
LSM8-201ENST00000249299 SHBQ15464 509 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 RBBP7Q16576 425 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 HLA-BQ31612 363 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 C14orf28Q4W4Y0 310 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 TRIM61Q5EBN2 209 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 PAGE2BQ5JRK9 111 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 SH2D4BQ5SQS7 431 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 PRAMEF14Q5SWL7 426 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 PRAMEF13Q5VWM6 474 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 KANK2Q63ZY3 851 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ATG9BQ674R7 924 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ATG14Q6ZNE5 492 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 TMEM26Q6ZUK4 368 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 KANSL1Q7Z3B3 1105 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 SLC25A45Q8N413 288 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ARL10Q8N8L6 244 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 SNX31Q8N9S9 440 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 FAM181AQ8N9Y4 354 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ABHD11Q8NFV4 315 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 UBE2E3Q969T4 207 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ESAMQ96AP7 390 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 MED8Q96G25 268 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 SEC16BQ96JE7 1060 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 OR4K3Q96R72 315 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 EFCAB11Q9BUY7 163 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 SRMSQ9H3Y6 488 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ZNF395Q9H8N7 513 aaPredicted RBP12.51□□□□□ -0.41
LSM8-201ENST00000249299 ACTR8Q9H981 624 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 ICKQ9UPZ9 632 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 PCDHGB2Q9Y5G2 931 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 KLK4Q9Y5K2 254 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 USH1CQ9Y6N9 552 aa12.51□□□□□ -0.41
LSM8-201ENST00000249299 A0A1W2PPV9 198 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 KHNYNO15037 678 aaKnown RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 NUDT21O43809 227 aaKnown RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 PRICKLE3O43900 615 aaPredicted RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 LRP3O75074 770 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 VPS4BO75351 444 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 CRCPO75575 148 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 HGFP14210 728 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 PNLIPP16233 465 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 CXCR2P25025 360 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 MPSTP25325 297 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 GSTM2P28161 218 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 SERPINB1P30740 379 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 MPLP40238 635 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 GPR3P46089 330 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 ERVPABLB-1P60509 514 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 IRF8Q02556 426 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 GPR18Q14330 331 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 NR1D2Q14995 579 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 C18orf21Q32NC0 220 aaPredicted RBP12.5□□□□□ -0.41
LSM8-201ENST00000249299 UGT3A2Q3SY77 523 aa12.5□□□□□ -0.41
LSM8-201ENST00000249299 METTL21CQ5VZV1 264 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms