RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MTG2Q9H4K7 406 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 PCDH12Q9NPG4 1184 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 TMED5Q9Y3A6 229 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 A0A1W2PQ67 120 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 CARNS1A5YM72 827 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 TTC34A8MYJ7 566 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 GNGT2O14610 69 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 PER2O15055 1255 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 JUPP14923 745 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 PIGAP37287 484 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 HTRA3P83110 453 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 ARSIQ5FYB1 569 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 LY6G5CQ5SRR4 150 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 SPESP1Q6UW49 350 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 NAT16Q8N8M0 369 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 FRS2Q8WU20 508 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 GAB3Q8WWW8 586 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 SDCCAG3Q96C92 435 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 DTNBP1Q96EV8 351 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 RIOK2Q9BVS4 552 aaKnown RBP18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 SPHK2Q9NRA0 654 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 FAM118AQ9NWS6 357 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 ATXN10Q9UBB4 475 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 ERVW-1Q9UQF0 538 aa18.97■□□□□ 0.63
CDC42EP1-201ENST00000249014 NOTCH4Q99466 2003 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 HIDE1A8MVS5 230 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 TMX2-CTNND1H3BSU7 103 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 ZNF701M0R085 212 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 RFXANKO14593 260 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 SLCO2B1O94956 709 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CTSLP07711 333 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 MAPK1P28482 360 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 RECQLP46063 649 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 ERVFC1P60507 584 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CBX2Q14781 532 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 NEDD8Q15843 81 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CES5AQ6NT32 575 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 DOK6Q6PKX4 331 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 NEK10Q6ZWH5 1172 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 PJA1Q8NG27 643 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 ASZ1Q8WWH4 475 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 HEPHQ9BQS7 1158 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 MAGIXQ9H6Y5 334 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 TDP1Q9NUW8 608 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 HCFC2Q9Y5Z7 792 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 SERTM1A2A2V5 107 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 ARHGEF33A8MVX0 844 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 WNT9AO14904 365 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CLGNO14967 610 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 KPNA5O15131 536 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CYP2A6P11509 494 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 TIMP2P16035 220 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 PRKACGP22612 351 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 DCDC1P59894 354 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 ABRQ12979 859 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 HENMT1Q5T8I9 393 aaKnown RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 GPR107Q5VW38 600 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 FAM9CQ8IZT9 166 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 SVOPLQ8N434 492 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 LILRA3Q8N6C8 439 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 OR7A2PQ8NGA2 310 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 TRIM43Q96BQ3 446 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 FBXL8Q96CD0 374 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 REXO5Q96IC2 774 aaKnown RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 MRGPRX3Q96LB0 322 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 RDH12Q96NR8 316 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CRISPLD2Q9H0B8 497 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 ING2Q9H160 280 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 THG1LQ9NWX6 298 aaKnown RBP18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 USE1Q9NZ43 259 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CIDEBQ9UHD4 219 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 ERVK-11Q9UQG0 969 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 PCDHGA8Q9Y5G5 932 aa18.96■□□□□ 0.63
CDC42EP1-201ENST00000249014 CFAP99D6REC4 459 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 ATE1O95260 518 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 DCTP40126 519 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 IRF8Q02556 426 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 ABHD18Q0P651 414 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 POM121L1PQ3SYA9 428 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 CCSMST1Q4G0I0 132 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 ELMSAN1Q6PJG2 1045 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 THAP5Q7Z6K1 395 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 CHPFQ8IZ52 775 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 ZCCHC7Q8N3Z6 543 aaKnown RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 DDHD1Q8NEL9 900 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 FCRL1Q96LA6 429 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 TCF25Q9BQ70 676 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 REXO4Q9GZR2 422 aaKnown RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 NAA50Q9GZZ1 169 aaKnown RBP18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 U3KQV3 271 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 E7EQ34 232 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 TIMP1P01033 207 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 GSTM1P09488 218 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 ACPPP15309 386 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 IL7RP16871 459 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 DCKP27707 260 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 KIR3DL1P43629 444 aa18.95■□□□□ 0.62
CDC42EP1-201ENST00000249014 HPCAP84074 193 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms