RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 NKAPQ8N5F7 415 aaKnown RBP23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 NOA1Q8NC60 698 aaKnown RBP23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 ZNF480Q8WV37 535 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 CLIP3Q96DZ5 547 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 HIST1H2AHQ96KK5 128 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 CCDC138Q96M89 665 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 OLFM1Q99784 485 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 HIST1H2AJQ99878 128 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 H2AFJQ9BTM1 129 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 ACTR5Q9H9F9 607 aaPredicted RBP23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 PARVBQ9HBI1 364 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 POPDC3Q9HBV1 291 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 SMYD2Q9NRG4 433 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 ANKMY1Q9P2S6 941 aa23.42■■□□□ 1.34
SDF2L1-201ENST00000248958 KRT87PA6NCN2 255 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 PABPN1LA6NDY0 278 aaKnown RBP23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 OR2B3O76000 313 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 DLSTP36957 453 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 GRIA3P42263 894 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 GPX6P59796 221 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 CRTC2Q53ET0 693 aaPredicted RBP23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 KIAA1614Q5VZ46 1190 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 FAM20CQ8IXL6 584 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 SYTL1Q8IYJ3 562 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 LSM14AQ8ND56 463 aaKnown RBP23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 ANKRD7Q92527 254 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 MCMBPQ9BTE3 642 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 TRIM54Q9BYV2 358 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 LRRC4CQ9HCJ2 640 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 UTP6Q9NYH9 597 aaKnown RBP23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 CROTQ9UKG9 612 aa23.41■■□□□ 1.34
SDF2L1-201ENST00000248958 DSPP15924 2871 aaKnown RBP23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 E7ENX8 843 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 ERVH48-1M5A8F1 160 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 TSPAN12O95859 305 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 WT1P19544 449 aaPredicted RBP23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 TCN2P20062 427 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 GP5P40197 560 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 SLC12A2P55011 1212 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 POU4F1Q01851 419 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 TAP2Q03519 686 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 NAB1Q13506 487 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 FCRL6Q6DN72 434 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 WBP1Q96G27 269 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 MIPEPQ99797 713 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 DPH2Q9BQC3 489 aaPredicted RBP23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 GPR87Q9BY21 358 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 EURLQ9NYK6 297 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 DMGDHQ9UI17 866 aaKnown RBP23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 SRPK3Q9UPE1 567 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 PDE10AQ9Y233 779 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 PCDHGA6Q9Y5G7 932 aa23.4■■□□□ 1.34
SDF2L1-201ENST00000248958 H3BMH7 237 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 MEN1O00255 615 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 ZNF749O43361 778 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 ITGB2P05107 769 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 ENO2P09104 434 aaPredicted RBP23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 ZNF37AP17032 561 aaPredicted RBP23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 PSMB5P28074 263 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 AP1S2P56377 157 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 ABATP80404 500 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 PRDX1Q06830 199 aaKnown RBP23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 DEFB110Q30KQ9 67 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 TCTE1Q5JU00 501 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 SUSD1Q6UWL2 747 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 ZNF517Q6ZMY9 492 aaPredicted RBP23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 RELL1Q8IUW5 271 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 MCATQ8IVS2 390 aaKnown RBP23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 DSELQ8IZU8 1212 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 TSPAN17Q96FV3 270 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 CATSPER2Q96P56 530 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 RBBP8Q99708 897 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 MRPS30Q9NP92 439 aaKnown RBP23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 ADAMTS6Q9UKP5 1117 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 KLHL20Q9Y2M5 609 aa23.39■■□□□ 1.33
SDF2L1-201ENST00000248958 CXorf49A8MYA2 514 aaPredicted RBP23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 TERTO14746 1132 aaKnown RBP23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 SRPX2O60687 465 aaPredicted RBP23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 RECKO95980 971 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 SAT1P21673 171 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 IMPA1P29218 277 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 RORAP35398 523 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 TAS2R39P59534 338 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 GPS2Q13227 327 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 DNASE1L3Q13609 305 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 TSTA3Q13630 321 aaPredicted RBP23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 GRTP1Q5TC63 336 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 CTAGE3PQ8IX95 158 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 LRRC56Q8IYG6 542 aaPredicted RBP23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 CT55Q8WUE5 264 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 DLG3Q92796 817 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 MR1Q95460 341 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 RNF31Q96EP0 1072 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 PCBD2Q9H0N5 130 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 ENAMQ9NRM1 1142 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 PCMTD2Q9NV79 361 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 IRAK4Q9NWZ3 460 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 TAC3Q9UHF0 121 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 IL17BQ9UHF5 180 aa23.38■■□□□ 1.33
SDF2L1-201ENST00000248958 NOVA2Q9UNW9 492 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms