RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 METTL12A8MUP2 240 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 MAP3K13O43283 966 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 WFS1O76024 890 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 ALDOCP09972 364 aaKnown RBP18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 NPPBP16860 134 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 ACTR1BP42025 376 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 ACTR1AP61163 376 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 PCDH1Q08174 1060 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 ILF3Q12906 894 aaKnown RBP eCLIP18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 CUL3Q13618 768 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 DOC2AQ14183 400 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 ALG11Q2TAA5 492 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 AP5B1Q2VPB7 878 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 DNAL1Q4LDG9 190 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 USP39Q53GS9 565 aaKnown RBP18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 C6orf136Q5SQH8 315 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 FRG2Q64ET8 278 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 GRHL2Q6ISB3 625 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 SUSD1Q6UWL2 747 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 SFRP1Q8N474 314 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 FRG2BQ96QU4 278 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 RTKNQ9BST9 563 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 TBC1D10AQ9BXI6 508 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 PCBD2Q9H0N5 130 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 TMEM168Q9H0V1 697 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 FARSBQ9NSD9 589 aaKnown RBP18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 CCDC167Q9P0B6 97 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 INVSQ9Y283 1065 aa18.13■□□□□ 0.49
TNFSF9-201ENST00000245817 KCNE1BA0A087WTH5 132 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 PRR19A6NJB7 356 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 TNFRSF10AO00220 468 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 AXIN1O15169 862 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 PDYNP01213 254 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC2A4P14672 509 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 CD27P26842 260 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 NDUFS1P28331 727 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 RPL6Q02878 288 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 EMX2Q04743 252 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 ZNF33BQ06732 778 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 RPE65Q16518 533 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 HIST2H2ACQ16777 129 aaPredicted RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 PAGE2BQ5JRK9 111 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 PRAMEF14Q5SWL7 426 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 PRAMEF13Q5VWM6 474 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 HIST2H2AA3Q6FI13 130 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 DUS1LQ6P1R4 473 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 WASH2PQ6VEQ5 465 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC36A4Q6YBV0 504 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 TMPRSS11BQ86T26 416 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 LONP2Q86WA8 852 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 DCP2Q8IU60 420 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 RGL4Q8IZJ4 473 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 C2orf73Q8N5S3 287 aaPredicted RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 DEFB119Q8N690 84 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 RBM15BQ8NDT2 890 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 SMPDL3AQ92484 453 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 NEIL2Q969S2 332 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 REPS1Q96D71 796 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 CAMK1GQ96NX5 476 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 WASH6PQ9NQA3 447 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 PCDHGA11Q9Y5H2 935 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 DGKBQ9Y6T7 804 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 TMEM221A6NGB7 291 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 OR52A4PA6NMU1 304 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 MEI4A8MW99 385 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 M0R296 226 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 LSM1O15116 133 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 MTHFD1P11586 935 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 AK4P27144 223 aaPredicted RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 MAGEA9P43362 315 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 ACADVLP49748 655 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 BLKP51451 505 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 GRIK2Q13002 908 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 STX5Q13190 355 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 TCEA2Q15560 299 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 CYP2A13Q16696 494 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 SMU1Q2TAY7 513 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC30A9Q6PML9 568 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 LCTLQ6UWM7 567 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 ABRAXAS1Q6UWZ7 409 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 LRRC56Q8IYG6 542 aaPredicted RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 SLC5A11Q8WWX8 675 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 EFCAB11Q9BUY7 163 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 COL25A1Q9BXS0 654 aaPredicted RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 NOP53Q9NZM5 478 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 TBC1D29Q9UFV1 150 aa18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 EIF3LQ9Y262 564 aaKnown RBP18.12■□□□□ 0.49
TNFSF9-201ENST00000245817 SPTY2D1-AS1A0A0U1RR47 76 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 GSC2O15499 205 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 PRAMEF4O60810 478 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 SEC22BO75396 215 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 SNRPB2P08579 225 aaKnown RBP18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 C1GALT1C1LP0DN25 315 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 ERGP11308 486 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 CASP2P42575 452 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 NEK2P51955 445 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 HMGCS1Q01581 520 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 LAPTM5Q13571 262 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 MMEL1Q495T6 779 aa18.11■□□□□ 0.49
TNFSF9-201ENST00000245817 PRAMEF9Q5VWM5 478 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms